PlantSME Plant secondary metabolism enzyme database

Solanum tuberosum (solanum_tuberosum)

Imported from atlas release summary for Solanum tuberosum.

1621
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 520 15 UGT (179) View species results
Alkaloid pathway 365 24 7DLGT (90) View species results
Phenylpropanoid pathway 263 11 POD (104) View species results
Flavonoid pathway 225 13 UFGT (150) View species results
Rosmarinic acid pathway 167 6 C4H (101) View species results
Steroid pathway 81 11 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1877 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ANS/LDOX
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Gene Pathway Family Confidence Status Best Target
Stub01G0002890.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Stub01G0029360.6 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub01G0045760.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub02G0001360.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub02G0012050.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Stub03G0002580.4 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub03G0002630.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub03G0002670.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub03G0002690.2 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub03G0002700.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub03G0002710.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub03G0002980.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00005__sp_Q96323_LDOX_ARATH
Stub03G0019950.3 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Stub03G0019960.2 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Stub04G0011290.2 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub05G0001550.2 Flavonoid ANS/LDOX low borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub05G0001560.1 Flavonoid ANS/LDOX medium pass ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub05G0009950.1 Flavonoid ANS/LDOX low borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub07G0015880.1 Flavonoid ANS/LDOX low borderline ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Stub07G0015880.2 Flavonoid ANS/LDOX low borderline ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Stub07G0023730.1 Flavonoid ANS/LDOX medium pass ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub07G0023730.2 Flavonoid ANS/LDOX medium pass ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Stub08G0001270.1 Flavonoid ANS/LDOX low borderline ANS_LDOX__00005__sp_Q96323_LDOX_ARATH
Stub08G0008120.13 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub09G0001180.2 Flavonoid ANS/LDOX medium pass ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub10G0000610.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00005__sp_Q96323_LDOX_ARATH
Stub10G0000610.2 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub10G0000880.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00003__sp_O04274_LDOX_PERFR
Stub10G0004400.1 Flavonoid ANS/LDOX low borderline ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Stub10G0027120.2 Flavonoid ANS/LDOX medium pass ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub10G0027120.3 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub11G0004910.1 Flavonoid ANS/LDOX low borderline ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Stub12G0014700.2 Flavonoid ANS/LDOX low borderline ANS_LDOX__00005__sp_Q96323_LDOX_ARATH
Stub12G0019740.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Stub12G0023370.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00005__sp_Q96323_LDOX_ARATH
Stub12G0023390.2 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH