Solanum tuberosum (solanum_tuberosum)
Imported from atlas release summary for Solanum tuberosum.
1621
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1621
Candidate Genes
C4H
7.45%
C3'H/CYP98A
6.6%
BAHD
4.78%
UGT
4.4%
T3O
4.24%
7DLGT
4.12%
UFGT
4.05%
CYP76
4.03%
Other Families
60.33%
More Families (93)
IFS
171
4.0%
4CL
135
3.16%
F3H
132
3.09%
BR6OX2/CYP85A2
119
2.79%
F3'H/CYP75B
118
2.76%
POD
106
2.48%
H6H
94
2.2%
CYP71
92
2.15%
DWF4/CYP90B1
87
2.04%
CODM/T6ODM
76
1.78%
TPS
71
1.66%
NMT
69
1.62%
GES
59
1.38%
TAT
52
1.22%
STR
45
1.05%
TRI/TRII
45
1.05%
SMT1/SMT2/SMT3
43
1.01%
CAS
40
0.94%
T16H
39
0.91%
IFR
38
0.89%
CYP90D1
37
0.87%
ANS/LDOX
36
0.84%
CAD
36
0.84%
F5H/CYP84A
35
0.82%
LAC
34
0.8%
COMT
33
0.77%
SLS
32
0.75%
G8O/G8H
30
0.7%
CSE
30
0.7%
FNS
29
0.68%
16OMT
28
0.66%
PYKS
27
0.63%
F3'5'H/CYP75A
27
0.63%
CYP51G1
27
0.63%
7DLH
26
0.61%
IO
24
0.56%
GS
22
0.52%
NCS
21
0.49%
BBE
18
0.42%
PAL
18
0.42%
CCR
18
0.42%
CPD/CYP90A1
18
0.42%
FPPS
18
0.42%
HCT
17
0.4%
BR6OX1/CYP85A1
17
0.4%
8HGO
14
0.33%
COR
14
0.33%
LAMT
14
0.33%
TYDC_DDC
14
0.33%
SGD
13
0.3%
ANR
13
0.3%
CHS
13
0.3%
SQS/FDFT1
13
0.3%
TDC
11
0.26%
DFR
11
0.26%
HMGR
11
0.26%
CYP80B1
10
0.23%
RAS
10
0.23%
AACT
9
0.21%
PMT
8
0.19%
MPO
8
0.19%
ROT3/CYP90C1
8
0.19%
SMO1/SMO2
7
0.16%
GGPPS
7
0.16%
CYP719
6
0.14%
CCoAOMT
6
0.14%
SQE
6
0.14%
FLS
5
0.12%
CPR
5
0.12%
DET2
5
0.12%
ODC
4
0.09%
DXS
4
0.09%
MCT/IspD
4
0.09%
ADC
3
0.07%
CNMT
3
0.07%
MVD
3
0.07%
XMT_MXMT_DXMT
2
0.05%
ISY
2
0.05%
CHI
2
0.05%
FK
2
0.05%
HDS/IspG
2
0.05%
IDI
2
0.05%
MVK
2
0.05%
HMGS
2
0.05%
6OMT_4OMT_SOMT
1
0.02%
CYP80F1
1
0.02%
DWF7
1
0.02%
CPI1
1
0.02%
DWF1
1
0.02%
HYD1
1
0.02%
GPPS
1
0.02%
CMK/IspE
1
0.02%
PMK
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 520 | 15 | UGT (179) | View species results |
| Alkaloid pathway | 365 | 24 | 7DLGT (90) | View species results |
| Phenylpropanoid pathway | 263 | 11 | POD (104) | View species results |
| Flavonoid pathway | 225 | 13 | UFGT (150) | View species results |
| Rosmarinic acid pathway | 167 | 6 | C4H (101) | View species results |
| Steroid pathway | 81 | 11 | CAS (30) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1877 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 231 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Stub04G0022040.2 | Terpenoid | UGT | medium | pass | UGT__00033__sp_F8WKW8_UGT9_GARJA |
| Stub04G0022040.3 | Terpenoid | UGT | medium | pass | UGT__00033__sp_F8WKW8_UGT9_GARJA |
| Stub04G0023650.1 | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| Stub04G0026020.2 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Stub04G0026290.1 | Terpenoid | UGT | medium | pass | UGT__00071__sp_Q6VAA6_U74G1_STERE |
| Stub04G0026310.1 | Terpenoid | UGT | medium | pass | UGT__00071__sp_Q6VAA6_U74G1_STERE |
| Stub04G0030450.1 | Terpenoid | UGT | medium | pass | UGT__00009__sp_A0A0G4DBR5_FG3N_SOYBN |
| Stub04G0032950.1 | Terpenoid | UGT | medium | pass | UGT__00015__sp_A0A193AU77_GGT24_PUNGR |
| Stub05G0002780.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Stub05G0002800.1 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Stub05G0003160.3 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Stub05G0003160.4 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Stub05G0004520.1 | Terpenoid | UGT | medium | pass | UGT__00002__sp_A0A067YBQ3_UGT13_PUEML |
| Stub05G0004560.1 | Terpenoid | UGT | medium | pass | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| Stub05G0016900.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Stub05G0016900.2 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Stub05G0016900.3 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Stub05G0016910.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Stub05G0023270.1 | Terpenoid | UGT | medium | pass | UGT__00110__sp_Q9ZQ95_U73C6_ARATH |
| Stub05G0024970.1 | Terpenoid | UGT | medium | pass | UGT__00064__sp_P0DO71_GT941_SIRGR |
| Stub05G0025210.2 | Terpenoid | UGT | medium | pass | UGT__00038__sp_K4CWS6_U75C1_SOLLC |
| Stub05G0025280.1 | Terpenoid | UGT | low | borderline | UGT__00028__sp_D3UAG1_U7A16_PYRCO |
| Stub05G0025400.1 | Terpenoid | UGT | medium | pass | UGT__00033__sp_F8WKW8_UGT9_GARJA |
| Stub05G0025520.1 | Terpenoid | UGT | medium | pass | UGT__00038__sp_K4CWS6_U75C1_SOLLC |
| Stub05G0025850.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Stub05G0026300.1 | Terpenoid | UGT | medium | pass | UGT__00013__sp_A0A172J2D0_UGT2_PUEML |
| Stub06G0002360.1 | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| Stub06G0002670.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Stub06G0003000.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Stub06G0003020.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Stub06G0003040.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Stub06G0003060.2 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Stub06G0003060.3 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Stub06G0010990.1 | Terpenoid | UGT | medium | pass | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| Stub06G0012890.1 | Terpenoid | UGT | low | borderline | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Stub06G0014520.1 | Terpenoid | UGT | medium | pass | UGT__00037__sp_I1LCI8_FG2KO_SOYBN |
| Stub06G0016590.6 | Terpenoid | UGT | medium | pass | UGT__00040__sp_K4D422_U73C4_SOLLC |
| Stub06G0017080.1 | Terpenoid | UGT | medium | pass | UGT__00050__sp_O22822_U74F2_ARATH |
| Stub06G0018510.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Stub06G0021660.1 | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| Stub06G0021690.1 | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| Stub06G0021690.2 | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| Stub06G0021900.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Stub06G0021900.4 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Stub06G0023790.3 | Terpenoid | UGT | medium | pass | UGT__00112__sp_Q9ZQG4_U73B5_ARATH |
| Stub06G0031450.1 | Terpenoid | UGT | medium | pass | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| Stub06G0031450.2 | Terpenoid | UGT | medium | pass | UGT__00093__sp_Q9LR44_U75B1_ARATH |
| Stub06G0031450.3 | Terpenoid | UGT | medium | pass | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| Stub07G0000200.1 | Terpenoid | UGT | medium | pass | UGT__00021__sp_A7MAS5_75L17_MALDO |
| Stub07G0000210.2 | Terpenoid | UGT | medium | pass | UGT__00038__sp_K4CWS6_U75C1_SOLLC |