PlantSME Plant secondary metabolism enzyme database

Solanum tuberosum (solanum_tuberosum)

Imported from atlas release summary for Solanum tuberosum.

1621
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 520 15 UGT (179) View species results
Alkaloid pathway 365 24 7DLGT (90) View species results
Phenylpropanoid pathway 263 11 POD (104) View species results
Flavonoid pathway 225 13 UFGT (150) View species results
Rosmarinic acid pathway 167 6 C4H (101) View species results
Steroid pathway 81 11 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1877 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Stub01G0006180.1 Rosmarinic Acid 4CL low borderline
Stub01G0023060.2 Rosmarinic Acid 4CL medium pass
Stub01G0023060.3 Rosmarinic Acid 4CL medium pass
Stub02G0017660.5 Rosmarinic Acid 4CL low borderline
Stub02G0031240.1 Rosmarinic Acid 4CL medium pass
Stub03G0002910.1 Rosmarinic Acid 4CL low borderline
Stub03G0017610.1 Rosmarinic Acid 4CL medium pass
Stub03G0021000.1 Rosmarinic Acid 4CL medium pass
Stub03G0029510.3 Rosmarinic Acid 4CL low borderline
Stub03G0029530.1 Rosmarinic Acid 4CL low borderline
Stub03G0032290.1 Rosmarinic Acid 4CL low borderline
Stub03G0032290.2 Rosmarinic Acid 4CL low borderline
Stub03G0032320.1 Rosmarinic Acid 4CL low borderline
Stub03G0032320.2 Rosmarinic Acid 4CL low borderline
Stub04G0021330.1 Rosmarinic Acid 4CL low borderline
Stub04G0026490.2 Rosmarinic Acid 4CL medium pass
Stub04G0026490.3 Rosmarinic Acid 4CL medium pass
Stub04G0033250.2 Rosmarinic Acid 4CL medium pass
Stub05G0009200.1 Rosmarinic Acid 4CL low borderline
Stub05G0009200.2 Rosmarinic Acid 4CL low borderline
Stub05G0009210.1 Rosmarinic Acid 4CL low borderline
Stub05G0009210.2 Rosmarinic Acid 4CL medium pass
Stub05G0009490.5 Rosmarinic Acid 4CL medium pass
Stub05G0009500.2 Rosmarinic Acid 4CL medium pass
Stub05G0021860.1 Rosmarinic Acid 4CL low borderline
Stub05G0021880.1 Rosmarinic Acid 4CL low borderline
Stub06G0014110.1 Rosmarinic Acid 4CL medium pass
Stub06G0027030.3 Rosmarinic Acid 4CL medium pass
Stub07G0012390.1 Rosmarinic Acid 4CL low borderline
Stub07G0024590.1 Rosmarinic Acid 4CL medium pass
Stub08G0000630.1 Rosmarinic Acid 4CL medium pass
Stub08G0014260.2 Rosmarinic Acid 4CL medium pass
Stub08G0023900.2 Rosmarinic Acid 4CL medium pass
Stub09G0020860.1 Rosmarinic Acid 4CL medium pass
Stub10G0000480.1 Rosmarinic Acid 4CL medium pass
Stub10G0000540.2 Rosmarinic Acid 4CL medium pass
Stub10G0015610.1 Rosmarinic Acid 4CL low borderline
Stub10G0015650.1 Rosmarinic Acid 4CL low borderline
Stub10G0015660.1 Rosmarinic Acid 4CL low borderline
Stub11G0000600.3 Rosmarinic Acid 4CL medium pass
Stub11G0002940.3 Rosmarinic Acid 4CL medium pass
Stub11G0009010.1 Rosmarinic Acid 4CL low borderline
Stub12G0004780.4 Rosmarinic Acid 4CL medium pass
Stub12G0004780.9 Rosmarinic Acid 4CL medium pass
Stub12G0008570.1 Rosmarinic Acid 4CL medium pass
Stub00G0001290.2 Rosmarinic Acid C4H medium pass
Stub00G0005200.1 Rosmarinic Acid C4H low borderline
Stub00G0008750.1 Rosmarinic Acid C4H medium pass
Stub00G0011030.1 Rosmarinic Acid C4H low borderline
Stub00G0011820.2 Rosmarinic Acid C4H low borderline