PlantSME Plant secondary metabolism enzyme database

Solanum tuberosum (solanum_tuberosum)

Imported from atlas release summary for Solanum tuberosum.

1842
Candidate Protein Records
1621
Pathway-Level Records
4270
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 520 15 UGT (179) View species results
Alkaloid pathway 365 24 7DLGT (90) View species results
Phenylpropanoid pathway 263 11 POD (104) View species results
Flavonoid pathway 225 13 UFGT (150) View species results
Rosmarinic acid pathway 167 6 C4H (101) View species results
Steroid pathway 81 11 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1877 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Stub00G0003600.2 Terpenoid GGPPS medium borderline
Stub00G0003630.1 Terpenoid GGPPS medium borderline
Stub01G0035680.2 Terpenoid GGPPS medium borderline
Stub06G0021420.1 Terpenoid GGPPS medium borderline
Stub06G0026830.1 Terpenoid GGPPS medium borderline
Stub07G0017020.2 Terpenoid GGPPS medium borderline
Stub08G0012270.1 Terpenoid GGPPS medium borderline
Stub00G0009920.1 Terpenoid GPPS low borderline
Stub01G0014430.1 Terpenoid HDS/IspG high pass
Stub04G0003420.1 Terpenoid HDS/IspG low borderline
Stub01G0024640.1 Terpenoid HMGR medium pass
Stub04G0027670.4 Terpenoid HMGR medium pass
Stub04G0027670.5 Terpenoid HMGR medium pass
Stub07G0004690.3 Terpenoid HMGR medium pass
Stub07G0017870.2 Terpenoid HMGR medium pass
Stub07G0025920.2 Terpenoid HMGR medium pass
Stub07G0026420.3 Terpenoid HMGR medium pass
Stub08G0000580.1 Terpenoid HMGR medium pass
Stub08G0015160.1 Terpenoid HMGR medium pass
Stub08G0019780.1 Terpenoid HMGR medium pass
Stub10G0004110.1 Terpenoid HMGR medium pass
Stub10G0020900.3 Terpenoid HMGS high pass
Stub12G0003080.1 Terpenoid HMGS high pass
Stub02G0013380.1 Terpenoid IDI medium pass
Stub07G0007820.1 Terpenoid IDI medium pass
Stub03G0019980.1 Terpenoid MCT/IspD low borderline
Stub08G0025320.1 Terpenoid MCT/IspD medium pass
Stub08G0025330.1 Terpenoid MCT/IspD high pass
Stub08G0025340.1 Terpenoid MCT/IspD high pass
Stub05G0013430.1 Terpenoid MVD medium pass
Stub06G0008950.1 Terpenoid MVD low borderline
Stub10G0027040.1 Terpenoid MVD medium pass
Stub05G0016240.1 Terpenoid MVK low borderline
Stub09G0019810.1 Terpenoid MVK medium pass
Stub07G0016570.1 Terpenoid PMK medium pass
Stub01G0002850.2 Terpenoid TPS medium pass
Stub01G0002860.3 Terpenoid TPS medium pass
Stub01G0002860.5 Terpenoid TPS medium pass
Stub01G0002860.6 Terpenoid TPS medium pass
Stub01G0003070.1 Terpenoid TPS medium pass
Stub01G0004720.1 Terpenoid TPS medium pass
Stub01G0023810.1 Terpenoid TPS medium pass
Stub01G0037430.4 Terpenoid TPS low borderline
Stub02G0012990.1 Terpenoid TPS medium pass
Stub02G0015180.1 Terpenoid TPS medium pass
Stub02G0015200.2 Terpenoid TPS medium pass
Stub02G0028180.2 Terpenoid TPS medium pass
Stub02G0028190.1 Terpenoid TPS medium pass
Stub02G0028200.1 Terpenoid TPS medium pass
Stub02G0028220.1 Terpenoid TPS medium pass