Solanum tuberosum (solanum_tuberosum)
Imported from atlas release summary for Solanum tuberosum.
1621
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1621
Candidate Genes
C4H
7.45%
C3'H/CYP98A
6.6%
BAHD
4.78%
UGT
4.4%
T3O
4.24%
7DLGT
4.12%
UFGT
4.05%
CYP76
4.03%
Other Families
60.33%
More Families (93)
IFS
171
4.0%
4CL
135
3.16%
F3H
132
3.09%
BR6OX2/CYP85A2
119
2.79%
F3'H/CYP75B
118
2.76%
POD
106
2.48%
H6H
94
2.2%
CYP71
92
2.15%
DWF4/CYP90B1
87
2.04%
CODM/T6ODM
76
1.78%
TPS
71
1.66%
NMT
69
1.62%
GES
59
1.38%
TAT
52
1.22%
STR
45
1.05%
TRI/TRII
45
1.05%
SMT1/SMT2/SMT3
43
1.01%
CAS
40
0.94%
T16H
39
0.91%
IFR
38
0.89%
CYP90D1
37
0.87%
ANS/LDOX
36
0.84%
CAD
36
0.84%
F5H/CYP84A
35
0.82%
LAC
34
0.8%
COMT
33
0.77%
SLS
32
0.75%
G8O/G8H
30
0.7%
CSE
30
0.7%
FNS
29
0.68%
16OMT
28
0.66%
PYKS
27
0.63%
F3'5'H/CYP75A
27
0.63%
CYP51G1
27
0.63%
7DLH
26
0.61%
IO
24
0.56%
GS
22
0.52%
NCS
21
0.49%
BBE
18
0.42%
PAL
18
0.42%
CCR
18
0.42%
CPD/CYP90A1
18
0.42%
FPPS
18
0.42%
HCT
17
0.4%
BR6OX1/CYP85A1
17
0.4%
8HGO
14
0.33%
COR
14
0.33%
LAMT
14
0.33%
TYDC_DDC
14
0.33%
SGD
13
0.3%
ANR
13
0.3%
CHS
13
0.3%
SQS/FDFT1
13
0.3%
TDC
11
0.26%
DFR
11
0.26%
HMGR
11
0.26%
CYP80B1
10
0.23%
RAS
10
0.23%
AACT
9
0.21%
PMT
8
0.19%
MPO
8
0.19%
ROT3/CYP90C1
8
0.19%
SMO1/SMO2
7
0.16%
GGPPS
7
0.16%
CYP719
6
0.14%
CCoAOMT
6
0.14%
SQE
6
0.14%
FLS
5
0.12%
CPR
5
0.12%
DET2
5
0.12%
ODC
4
0.09%
DXS
4
0.09%
MCT/IspD
4
0.09%
ADC
3
0.07%
CNMT
3
0.07%
MVD
3
0.07%
XMT_MXMT_DXMT
2
0.05%
ISY
2
0.05%
CHI
2
0.05%
FK
2
0.05%
HDS/IspG
2
0.05%
IDI
2
0.05%
MVK
2
0.05%
HMGS
2
0.05%
6OMT_4OMT_SOMT
1
0.02%
CYP80F1
1
0.02%
DWF7
1
0.02%
CPI1
1
0.02%
DWF1
1
0.02%
HYD1
1
0.02%
GPPS
1
0.02%
CMK/IspE
1
0.02%
PMK
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 520 | 15 | UGT (179) | View species results |
| Alkaloid pathway | 365 | 24 | 7DLGT (90) | View species results |
| Phenylpropanoid pathway | 263 | 11 | POD (104) | View species results |
| Flavonoid pathway | 225 | 13 | UFGT (150) | View species results |
| Rosmarinic acid pathway | 167 | 6 | C4H (101) | View species results |
| Steroid pathway | 81 | 11 | CAS (30) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1877 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 231 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Stub08G0009690.1 | Terpenoid | BAHD | low | borderline | BAHD__00018__sp_I1MRZ6_DAT32_SOYBN |
| Stub08G0009690.2 | Terpenoid | BAHD | medium | pass | BAHD__00069__sp_Q9C5W0_DGAT3_ARATH |
| Stub08G0013380.1 | Terpenoid | BAHD | medium | pass | BAHD__00038__sp_Q3EC11_ZDHC2_ARATH |
| Stub08G0013380.2 | Terpenoid | BAHD | medium | pass | BAHD__00038__sp_Q3EC11_ZDHC2_ARATH |
| Stub08G0013390.1 | Terpenoid | BAHD | medium | pass | BAHD__00038__sp_Q3EC11_ZDHC2_ARATH |
| Stub08G0017980.1 | Terpenoid | BAHD | medium | pass | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| Stub08G0018740.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Stub09G0002480.1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Stub09G0002490.1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Stub09G0002800.1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Stub09G0005460.1 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| Stub09G0015620.1 | Terpenoid | BAHD | medium | pass | BAHD__00031__sp_P0DO25_AT9_ACTDE |
| Stub09G0016470.2 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Stub09G0019980.1 | Terpenoid | BAHD | medium | pass | BAHD__00004__sp_A0A0M4FCN7_RAM2_PETHY |
| Stub09G0022070.2 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| Stub09G0026020.1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Stub09G0029140.2 | Terpenoid | BAHD | medium | pass | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| Stub09G0029190.1 | Terpenoid | BAHD | low | borderline | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| Stub09G0029210.1 | Terpenoid | BAHD | low | borderline | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| Stub09G0029920.1 | Terpenoid | BAHD | medium | pass | BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE |
| Stub09G0029930.3 | Terpenoid | BAHD | low | borderline | BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE |
| Stub10G0002210.2 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Stub10G0003530.1 | Terpenoid | BAHD | medium | pass | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| Stub10G0007990.1 | Terpenoid | BAHD | medium | pass | BAHD__00051__sp_Q7XA86_ZDH11_ARATH |
| Stub10G0008000.1 | Terpenoid | BAHD | medium | pass | BAHD__00051__sp_Q7XA86_ZDH11_ARATH |
| Stub10G0008000.3 | Terpenoid | BAHD | medium | pass | BAHD__00051__sp_Q7XA86_ZDH11_ARATH |
| Stub10G0009180.2 | Terpenoid | BAHD | medium | pass | BAHD__00011__sp_A1A442_DGAT2_RICCO |
| Stub10G0009190.1 | Terpenoid | BAHD | medium | pass | BAHD__00021__sp_K7K424_DAT2D_SOYBN |
| Stub10G0017500.1 | Terpenoid | BAHD | low | borderline | BAHD__00095__sp_Q9SZ58_BRAT1_ARATH |
| Stub10G0020000.1 | Terpenoid | BAHD | medium | pass | BAHD__00068__sp_Q9C533_ZDHC1_ARATH |
| Stub10G0020870.1 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| Stub10G0020890.3 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| Stub10G0022430.3 | Terpenoid | BAHD | low | borderline | BAHD__00032__sp_P0DO84_AT_STRNX |
| Stub10G0026030.2 | Terpenoid | BAHD | medium | pass | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| Stub11G0001620.1 | Terpenoid | BAHD | medium | pass | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| Stub11G0004840.1 | Terpenoid | BAHD | medium | pass | BAHD__00020__sp_K4D9Y4_ASAT3_SOLLC |
| Stub11G0005100.1 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Stub11G0005100.2 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Stub11G0005620.1 | Terpenoid | BAHD | medium | pass | BAHD__00082__sp_Q9LLY4_LPAT1_BRANA |
| Stub11G0005620.2 | Terpenoid | BAHD | medium | pass | BAHD__00082__sp_Q9LLY4_LPAT1_BRANA |
| Stub11G0005620.3 | Terpenoid | BAHD | medium | pass | BAHD__00082__sp_Q9LLY4_LPAT1_BRANA |
| Stub11G0005650.3 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| Stub11G0012280.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Stub11G0019630.1 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| Stub11G0021650.1 | Terpenoid | BAHD | low | borderline | BAHD__00032__sp_P0DO84_AT_STRNX |
| Stub11G0021660.2 | Terpenoid | BAHD | low | borderline | BAHD__00032__sp_P0DO84_AT_STRNX |
| Stub12G0001160.1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Stub12G0001300.1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Stub12G0001470.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Stub12G0003660.1 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |