PlantSME Plant secondary metabolism enzyme database

Solanum tuberosum (solanum_tuberosum)

Imported from atlas release summary for Solanum tuberosum.

1842
Candidate Protein Records
1621
Pathway-Level Records
4270
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 520 15 UGT (179) View species results
Alkaloid pathway 365 24 7DLGT (90) View species results
Phenylpropanoid pathway 263 11 POD (104) View species results
Flavonoid pathway 225 13 UFGT (150) View species results
Rosmarinic acid pathway 167 6 C4H (101) View species results
Steroid pathway 81 11 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1877 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Stub05G0009950.2 Alkaloid CODM/T6ODM medium borderline
Stub06G0015120.1 Alkaloid CODM/T6ODM medium borderline
Stub06G0017510.1 Alkaloid CODM/T6ODM medium borderline
Stub07G0000560.1 Alkaloid CODM/T6ODM medium borderline
Stub07G0007990.1 Alkaloid CODM/T6ODM medium borderline
Stub07G0007990.2 Alkaloid CODM/T6ODM medium borderline
Stub07G0007990.3 Alkaloid CODM/T6ODM medium borderline
Stub07G0007990.4 Alkaloid CODM/T6ODM medium borderline
Stub07G0015870.1 Alkaloid CODM/T6ODM medium borderline
Stub07G0023780.1 Alkaloid CODM/T6ODM medium borderline
Stub08G0008120.14 Alkaloid CODM/T6ODM medium borderline
Stub08G0008120.9 Alkaloid CODM/T6ODM medium borderline
Stub08G0020240.3 Alkaloid CODM/T6ODM medium borderline
Stub09G0001000.1 Alkaloid CODM/T6ODM medium borderline
Stub09G0001090.1 Alkaloid CODM/T6ODM medium borderline
Stub09G0001100.1 Alkaloid CODM/T6ODM medium borderline
Stub09G0001110.1 Alkaloid CODM/T6ODM medium borderline
Stub09G0001130.1 Alkaloid CODM/T6ODM medium borderline
Stub09G0001150.1 Alkaloid CODM/T6ODM medium borderline
Stub09G0001180.1 Alkaloid CODM/T6ODM medium borderline
Stub09G0001180.2 Alkaloid CODM/T6ODM medium borderline
Stub09G0001180.3 Alkaloid CODM/T6ODM medium borderline
Stub09G0010810.1 Alkaloid CODM/T6ODM medium borderline
Stub09G0012900.2 Alkaloid CODM/T6ODM medium borderline
Stub10G0000610.2 Alkaloid CODM/T6ODM medium borderline
Stub10G0000880.4 Alkaloid CODM/T6ODM medium borderline
Stub10G0001790.1 Alkaloid CODM/T6ODM medium borderline
Stub10G0004650.1 Alkaloid CODM/T6ODM medium borderline
Stub10G0011310.1 Alkaloid CODM/T6ODM medium borderline
Stub10G0011320.2 Alkaloid CODM/T6ODM medium borderline
Stub10G0027120.1 Alkaloid CODM/T6ODM medium borderline
Stub10G0027120.2 Alkaloid CODM/T6ODM medium pass
Stub11G0011830.1 Alkaloid CODM/T6ODM medium borderline
Stub11G0018260.2 Alkaloid CODM/T6ODM medium borderline
Stub11G0018510.1 Alkaloid CODM/T6ODM medium borderline
Stub11G0018510.3 Alkaloid CODM/T6ODM medium borderline
Stub12G0014700.2 Alkaloid CODM/T6ODM low borderline
Stub12G0017020.1 Alkaloid CODM/T6ODM medium borderline
Stub12G0019740.1 Alkaloid CODM/T6ODM medium borderline
Stub12G0021390.4 Alkaloid CODM/T6ODM medium borderline
Stub12G0021400.3 Alkaloid CODM/T6ODM medium borderline
Stub12G0023390.2 Alkaloid CODM/T6ODM medium borderline
Stub12G0023390.3 Alkaloid CODM/T6ODM medium borderline
Stub12G0023390.6 Alkaloid CODM/T6ODM medium borderline
Stub12G0026530.1 Alkaloid CODM/T6ODM medium borderline
Stub00G0009720.1 Alkaloid COR medium pass
Stub03G0009870.1 Alkaloid COR medium pass
Stub03G0024190.1 Alkaloid COR medium pass
Stub05G0006020.3 Alkaloid COR medium pass
Stub05G0025460.1 Alkaloid COR medium pass