PlantSME Plant secondary metabolism enzyme database

Solanum tuberosum (solanum_tuberosum)

Imported from atlas release summary for Solanum tuberosum.

1842
Candidate Protein Records
1621
Pathway-Level Records
4270
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 520 15 UGT (179) View species results
Alkaloid pathway 365 24 7DLGT (90) View species results
Phenylpropanoid pathway 263 11 POD (104) View species results
Flavonoid pathway 225 13 UFGT (150) View species results
Rosmarinic acid pathway 167 6 C4H (101) View species results
Steroid pathway 81 11 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1877 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Stub07G0007820.1 Terpenoid IDI medium pass
Stub03G0019980.1 Terpenoid MCT/IspD low borderline
Stub08G0025320.1 Terpenoid MCT/IspD medium pass
Stub08G0025330.1 Terpenoid MCT/IspD high pass
Stub08G0025340.1 Terpenoid MCT/IspD high pass
Stub05G0013430.1 Terpenoid MVD medium pass
Stub06G0008950.1 Terpenoid MVD low borderline
Stub10G0027040.1 Terpenoid MVD medium pass
Stub05G0016240.1 Terpenoid MVK low borderline
Stub09G0019810.1 Terpenoid MVK medium pass
Stub07G0016570.1 Terpenoid PMK medium pass
Stub01G0002850.2 Terpenoid TPS medium pass
Stub01G0002860.3 Terpenoid TPS medium pass
Stub01G0002860.5 Terpenoid TPS medium pass
Stub01G0002860.6 Terpenoid TPS medium pass
Stub01G0003070.1 Terpenoid TPS medium pass
Stub01G0004720.1 Terpenoid TPS medium pass
Stub01G0023810.1 Terpenoid TPS medium pass
Stub01G0037430.4 Terpenoid TPS low borderline
Stub02G0012990.1 Terpenoid TPS medium pass
Stub02G0015180.1 Terpenoid TPS medium pass
Stub02G0015200.2 Terpenoid TPS medium pass
Stub02G0028180.2 Terpenoid TPS medium pass
Stub02G0028190.1 Terpenoid TPS medium pass
Stub02G0028200.1 Terpenoid TPS medium pass
Stub02G0028220.1 Terpenoid TPS medium pass
Stub02G0028230.1 Terpenoid TPS medium pass
Stub02G0028240.1 Terpenoid TPS medium pass
Stub02G0028240.2 Terpenoid TPS medium pass
Stub02G0028240.3 Terpenoid TPS medium pass
Stub02G0028250.1 Terpenoid TPS medium pass
Stub02G0028250.2 Terpenoid TPS medium pass
Stub02G0028270.2 Terpenoid TPS medium pass
Stub02G0028800.1 Terpenoid TPS medium pass
Stub03G0010850.1 Terpenoid TPS medium pass
Stub03G0013310.1 Terpenoid TPS medium pass
Stub03G0013320.1 Terpenoid TPS medium pass
Stub03G0021750.1 Terpenoid TPS medium pass
Stub04G0007230.5 Terpenoid TPS medium pass
Stub04G0007570.1 Terpenoid TPS medium pass
Stub04G0019320.1 Terpenoid TPS medium pass
Stub04G0027270.3 Terpenoid TPS medium pass
Stub05G0009570.3 Terpenoid TPS medium pass
Stub05G0009570.4 Terpenoid TPS medium pass
Stub05G0009570.5 Terpenoid TPS medium pass
Stub05G0021150.1 Terpenoid TPS medium pass
Stub05G0021160.1 Terpenoid TPS medium pass
Stub06G0001230.1 Terpenoid TPS medium pass
Stub07G0008220.1 Terpenoid TPS medium pass
Stub08G0002590.1 Terpenoid TPS medium pass