PlantSME Plant secondary metabolism enzyme database

Sphagnum palustre (sphagnum_palustre)

Imported from atlas release summary for Sphagnum palustre.

1586
Candidate Protein Records
1110
Pathway-Level Records
2558
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Phenylpropanoid pathway 29.82% Terpenoid pathway 25.41% Alkaloid pathway 20.9% Flavonoid pathway 9.46% Rosmarinic acid pathway 8.65% Steroid pathway 5.77%
Family Distribution
POD 7.78% BAHD 7.66% 4CL 6.45% C3'H/CYP98A 4.81% NMT 4.53% C4H 4.46% STR 3.56% CYP76 3.09%
Other Families 57.66%
More Families (97)
IFS 70 2.74% IFR 62 2.42% GS 60 2.35% T3O 53 2.07% PYKS 49 1.92% F3H 49 1.92% TRI/TRII 47 1.84% DWF4/CYP90B1 43 1.68% CAD 40 1.56% BR6OX2/CYP85A2 40 1.56% F3'H/CYP75B 39 1.52% CSE 33 1.29% UFGT 31 1.21% UGT 31 1.21% H6H 30 1.17% CHS 29 1.13% CODM/T6ODM 28 1.09% CYP71 28 1.09% SMT1/SMT2/SMT3 27 1.06% 7DLGT 26 1.02% COMT 25 0.98% RAS 24 0.94% G8O/G8H 23 0.9% CCR 20 0.78% HCT 19 0.74% CAS 19 0.74% DFR 18 0.7% PAL 18 0.7% 16OMT 17 0.66% 8HGO 17 0.66% T16H 17 0.66% IO 16 0.63% SLS 16 0.63% F3'5'H/CYP75A 16 0.63% LAC 16 0.63% AACT 16 0.63% CYP90D1 15 0.59% 7DLH 14 0.55% ANR 14 0.55% GGPPS 14 0.55% BR6OX1/CYP85A1 13 0.51% CNMT 12 0.47% CPD/CYP90A1 12 0.47% SGD 11 0.43% FNS 11 0.43% DET2 10 0.39% HDS/IspG 10 0.39% PMT 9 0.35% COR 9 0.35% CPR 9 0.35% SQE 9 0.35% FK 9 0.35% ISY 8 0.31% ANS/LDOX 8 0.31% SMO1/SMO2 8 0.31% HMGR 8 0.31% TAT 7 0.27% FPPS 7 0.27% BBE 6 0.23% DWF5 6 0.23% ROT3/CYP90C1 6 0.23% DXS 6 0.23% TPS 6 0.23% ODC 5 0.2% CCoAOMT 5 0.2% HPPR 5 0.2% SQS/FDFT1 5 0.2% CMK/IspE 5 0.2% MVK 5 0.2% MPO 4 0.16% GES 4 0.16% NCS 4 0.16% TYDC_DDC 4 0.16% F5H/CYP84A 4 0.16% DWF1 4 0.16% HDR/IspH 4 0.16% 6OMT_4OMT_SOMT 3 0.12% ADC 3 0.12% CYP80B1 3 0.12% TDC 3 0.12% CPI1 3 0.12% HYD1 3 0.12% MCT/IspD 3 0.12% IDI 3 0.12% MVD 3 0.12% DXR 3 0.12% CYP719 2 0.08% CYP80F1 2 0.08% FLS 2 0.08% CHI 2 0.08% CYP51G1 2 0.08% DWF7 2 0.08% PMK 2 0.08% LAMT 1 0.04% XMT_MXMT_DXMT 1 0.04% HMGS 1 0.04% MDS/IspF 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 331 11 POD (191) View species results
Terpenoid pathway 282 21 BAHD (162) View species results
Alkaloid pathway 232 18 NMT (49) View species results
Flavonoid pathway 105 9 4CL (29) View species results
Rosmarinic acid pathway 96 7 C4H (30) View species results
Steroid pathway 64 12 CAS (18) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 750 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 239 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Spal3580620374060 Alkaloid NMT low borderline NMT__00067__sp_Q9T0G7_SUVH9_ARATH
Spal3581780379270 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Spal3582200380710 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Spal3582640383720 Alkaloid NMT low borderline NMT__00021__sp_O64827_SUVR5_ARATH
Spal3583230385700 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
Spal3585120387600 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Spal3585130387620 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Spal3601070389160 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Spal3601080389170 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Spal3612280390880 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
Spal3612320390920 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
Spal3693130401170 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Spal3693140401190 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Spal3722350403800 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
Spal3722380403820 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
Spal4276130408510 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH