Spirogloea muscicola (spirogloea_muscicola)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 33.87% Alkaloid pathway 26.04% Phenylpropanoid pathway 20.97% Steroid pathway 10.6% Rosmarinic acid pathway 4.61% Flavonoid pathway 3.92%

Family Distribution

434 Candidate Genes

BAHD 10.92% 4CL 10.84% NMT 6.05% POD 4.71% IFR 4.12% STR 3.7% GS 3.53% SMT1/SMT2/SMT3 2.94%

Other Families 53.19%

More Families (88)

CYP71 35 2.94% CSE 30 2.52% C3'H/CYP98A 30 2.52% C4H 28 2.35% CAD 22 1.85% CNMT 20 1.68% CYP76 20 1.68% TRI/TRII 19 1.6% SGD 16 1.34% AACT 15 1.26% IFS 14 1.18% FNS 13 1.09% CPR 13 1.09% T3O 11 0.92% PYKS 11 0.92% COR 11 0.92% DFR 10 0.84% CAS 10 0.84% SQS/FDFT1 10 0.84% BR6OX2/CYP85A2 10 0.84% DWF4/CYP90B1 10 0.84% MVK 10 0.84% F3H 9 0.76% TAT 9 0.76% GGPPS 9 0.76% SLS 8 0.67% CPD/CYP90A1 8 0.67% SMO1/SMO2 8 0.67% DET2 7 0.59% 8HGO 6 0.5% PMT 6 0.5% PAL 6 0.5% CHS 6 0.5% CCoAOMT 6 0.5% COMT 6 0.5% FPPS 6 0.5% MVD 6 0.5% IO 5 0.42% 6OMT_4OMT_SOMT 5 0.42% CHI 5 0.42% F3'5'H/CYP75A 5 0.42% LAC 5 0.42% RAS 5 0.42% HDR/IspH 5 0.42% CYP719 4 0.34% H6H 4 0.34% ISY 4 0.34% ANR 4 0.34% CCR 4 0.34% F5H/CYP84A 4 0.34% CYP51G1 4 0.34% HYD1 4 0.34% ODC 3 0.25% NCS 3 0.25% G8O/G8H 3 0.25% MPO 3 0.25% CODM/T6ODM 3 0.25% ADC 3 0.25% CYP80B1 3 0.25% T16H 3 0.25% TDC 3 0.25% F3'H/CYP75B 3 0.25% HPPR 3 0.25% DWF1 3 0.25% ROT3/CYP90C1 3 0.25% DWF7 3 0.25% FK 3 0.25% DWF5 3 0.25% CPI1 3 0.25% UGT 3 0.25% HDS/IspG 3 0.25% PMK 3 0.25% HMGR 3 0.25% HMGS 3 0.25% DXS 3 0.25% CMK/IspE 3 0.25% IDI 3 0.25% MDS/IspF 3 0.25% CYP80F1 2 0.17% XMT_MXMT_DXMT 2 0.17% 7DLGT 2 0.17% UFGT 2 0.17% BBE 1 0.08% LAMT 1 0.08% FLS 1 0.08% BR6OX1/CYP85A1 1 0.08% CYP90D1 1 0.08% GPPS 1 0.08%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	147	15	BAHD (83)	View species results
Alkaloid pathway	113	15	NMT (34)	View species results
Phenylpropanoid pathway	91	7	POD (48)	View species results
Steroid pathway	46	9	SMT1/SMT2/SMT3 (14)	View species results
Rosmarinic acid pathway	20	4	CPR (10)	View species results
Flavonoid pathway	17	6	4CL (4)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	215	BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	2	135	BAHD, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: NMT

Gene	Pathway	Family	Confidence	Status	Best Target
Smuss1000006990	Alkaloid	NMT	low	borderline	NMT__00061__sp_Q9SAH5_PLMT_ARATH
Smuss110016990	Alkaloid	NMT	medium	pass	NMT__00023__sp_O82210_ANM12_ARATH
Smuss1120019190	Alkaloid	NMT	medium	pass	NMT__00040__sp_Q84WW6_ASHH1_ARATH
Smuss1160022740	Alkaloid	NMT	medium	pass	NMT__00035__sp_Q6K431_TRX1_ORYSJ
Smuss120027040	Alkaloid	NMT	medium	pass	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Smuss1220028590	Alkaloid	NMT	low	borderline	NMT__00023__sp_O82210_ANM12_ARATH
Smuss1280033400	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH
Smuss1290034230	Alkaloid	NMT	low	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Smuss1330040160	Alkaloid	NMT	low	borderline	NMT__00068__sp_Q9XI84_RBCMT_ARATH
Smuss1360041860	Alkaloid	NMT	low	borderline	NMT__00023__sp_O82210_ANM12_ARATH
Smuss1360042050	Alkaloid	NMT	medium	pass	NMT__00060__sp_Q9MAT5_ANM10_ARATH
Smuss1370042610	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
Smuss1380043310	Alkaloid	NMT	medium	pass	NMT__00039__sp_Q84W92_ANM13_ARATH
Smuss140045310	Alkaloid	NMT	low	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Smuss14120048370	Alkaloid	NMT	low	borderline	NMT__00019__sp_O22781_SUVH2_ARATH
Smuss1500055510	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Smuss150055320	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
Smuss1540057890	Alkaloid	NMT	medium	pass	NMT__00041__sp_Q8GWT4_ANM15_ARATH
Smuss1550058980	Alkaloid	NMT	medium	pass	NMT__00016__sp_F4JNX3_CMKMT_ARATH
Smuss1580060820	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Smuss160063390	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
Smuss1650066530	Alkaloid	NMT	medium	borderline	NMT__00015__sp_C8YTM5_PEAM2_WHEAT
Smuss1680068340	Alkaloid	NMT	low	borderline	NMT__00068__sp_Q9XI84_RBCMT_ARATH
Smuss1690069260	Alkaloid	NMT	medium	pass	NMT__00032__sp_Q5PP37_ATXR2_ARATH
Smuss170071110	Alkaloid	NMT	medium	pass	NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Smuss1830079950	Alkaloid	NMT	medium	pass	NMT__00032__sp_Q5PP37_ATXR2_ARATH
Smuss1850080770	Alkaloid	NMT	medium	pass	NMT__00066__sp_Q9SU94_ANM11_ARATH
Smuss20091010	Alkaloid	NMT	low	borderline	NMT__00017__sp_F4K1J4_ATXR7_ARATH
Smuss2050097250	Alkaloid	NMT	medium	pass	NMT__00040__sp_Q84WW6_ASHH1_ARATH
Smuss220104930	Alkaloid	NMT	medium	pass	NMT__00024__sp_P0CB22_ATX2_ARATH
Smuss220105500	Alkaloid	NMT	medium	borderline	NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Smuss2250108440	Alkaloid	NMT	medium	pass	NMT__00016__sp_F4JNX3_CMKMT_ARATH
Smuss2280109400	Alkaloid	NMT	medium	pass	NMT__00032__sp_Q5PP37_ATXR2_ARATH
Smuss230111330	Alkaloid	NMT	medium	pass	NMT__00041__sp_Q8GWT4_ANM15_ARATH
Smuss2450118550	Alkaloid	NMT	low	borderline	NMT__00020__sp_O23372_ATXR3_ARATH
Smuss2460118930	Alkaloid	NMT	medium	pass	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Smuss250120570	Alkaloid	NMT	medium	borderline	NMT__00050__sp_Q944H0_PEAM2_ARATH
Smuss2620127420	Alkaloid	NMT	medium	pass	NMT__00061__sp_Q9SAH5_PLMT_ARATH
Smuss30141980	Alkaloid	NMT	low	borderline	NMT__00017__sp_F4K1J4_ATXR7_ARATH
Smuss30143370	Alkaloid	NMT	low	borderline	NMT__00061__sp_Q9SAH5_PLMT_ARATH
Smuss3050147570	Alkaloid	NMT	medium	pass	NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Smuss340158450	Alkaloid	NMT	medium	pass	NMT__00040__sp_Q84WW6_ASHH1_ARATH
Smuss340159130	Alkaloid	NMT	medium	pass	NMT__00041__sp_Q8GWT4_ANM15_ARATH
Smuss350161800	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
Smuss3510162970	Alkaloid	NMT	low	borderline	NMT__00020__sp_O23372_ATXR3_ARATH
Smuss3710168710	Alkaloid	NMT	low	borderline	NMT__00020__sp_O23372_ATXR3_ARATH
Smuss380170900	Alkaloid	NMT	low	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Smuss3860171950	Alkaloid	NMT	medium	pass	NMT__00066__sp_Q9SU94_ANM11_ARATH
Smuss390173450	Alkaloid	NMT	low	borderline	NMT__00016__sp_F4JNX3_CMKMT_ARATH
Smuss400178070	Alkaloid	NMT	medium	pass	NMT__00025__sp_P93831_CLF_ARATH