Spirogloea muscicola (spirogloea_muscicola)
Imported from atlas release summary for Spirogloea muscicola.
434
Candidate Genes
96
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
434
Candidate Genes
BAHD
10.92%
4CL
10.84%
NMT
6.05%
POD
4.71%
IFR
4.12%
STR
3.7%
GS
3.53%
SMT1/SMT2/SMT3
2.94%
Other Families
53.19%
More Families (88)
CYP71
35
2.94%
CSE
30
2.52%
C3'H/CYP98A
30
2.52%
C4H
28
2.35%
CAD
22
1.85%
CNMT
20
1.68%
CYP76
20
1.68%
TRI/TRII
19
1.6%
SGD
16
1.34%
AACT
15
1.26%
IFS
14
1.18%
FNS
13
1.09%
CPR
13
1.09%
T3O
11
0.92%
PYKS
11
0.92%
COR
11
0.92%
DFR
10
0.84%
CAS
10
0.84%
SQS/FDFT1
10
0.84%
BR6OX2/CYP85A2
10
0.84%
DWF4/CYP90B1
10
0.84%
MVK
10
0.84%
F3H
9
0.76%
TAT
9
0.76%
GGPPS
9
0.76%
SLS
8
0.67%
CPD/CYP90A1
8
0.67%
SMO1/SMO2
8
0.67%
DET2
7
0.59%
8HGO
6
0.5%
PMT
6
0.5%
PAL
6
0.5%
CHS
6
0.5%
CCoAOMT
6
0.5%
COMT
6
0.5%
FPPS
6
0.5%
MVD
6
0.5%
IO
5
0.42%
6OMT_4OMT_SOMT
5
0.42%
CHI
5
0.42%
F3'5'H/CYP75A
5
0.42%
LAC
5
0.42%
RAS
5
0.42%
HDR/IspH
5
0.42%
CYP719
4
0.34%
H6H
4
0.34%
ISY
4
0.34%
ANR
4
0.34%
CCR
4
0.34%
F5H/CYP84A
4
0.34%
CYP51G1
4
0.34%
HYD1
4
0.34%
ODC
3
0.25%
NCS
3
0.25%
G8O/G8H
3
0.25%
MPO
3
0.25%
CODM/T6ODM
3
0.25%
ADC
3
0.25%
CYP80B1
3
0.25%
T16H
3
0.25%
TDC
3
0.25%
F3'H/CYP75B
3
0.25%
HPPR
3
0.25%
DWF1
3
0.25%
ROT3/CYP90C1
3
0.25%
DWF7
3
0.25%
FK
3
0.25%
DWF5
3
0.25%
CPI1
3
0.25%
UGT
3
0.25%
HDS/IspG
3
0.25%
PMK
3
0.25%
HMGR
3
0.25%
HMGS
3
0.25%
DXS
3
0.25%
CMK/IspE
3
0.25%
IDI
3
0.25%
MDS/IspF
3
0.25%
CYP80F1
2
0.17%
XMT_MXMT_DXMT
2
0.17%
7DLGT
2
0.17%
UFGT
2
0.17%
BBE
1
0.08%
LAMT
1
0.08%
FLS
1
0.08%
BR6OX1/CYP85A1
1
0.08%
CYP90D1
1
0.08%
GPPS
1
0.08%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 147 | 15 | BAHD (83) | View species results |
| Alkaloid pathway | 113 | 15 | NMT (34) | View species results |
| Phenylpropanoid pathway | 91 | 7 | POD (48) | View species results |
| Steroid pathway | 46 | 9 | SMT1/SMT2/SMT3 (14) | View species results |
| Rosmarinic acid pathway | 20 | 4 | CPR (10) | View species results |
| Flavonoid pathway | 17 | 6 | 4CL (4) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 215 | BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 2 | 135 | BAHD, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Smuss1110018740 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss1210028250 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss1270033100 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss130035020 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss130036450 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss1400046680 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss1420048630 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss1480052470 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss1570060310 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss1650066400 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss1700071440 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss1760074590 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss1800078520 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss19270087070 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss2070097970 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss2130102170 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss250120420 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss250120910 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss250120970 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss250120980 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss2580124280 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss2580124450 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss270129450 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss270129470 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss270129760 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss280133740 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss30690147930 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss3230154640 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Smuss3430160440 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss410180760 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss430185360 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss440187570 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Smuss590214330 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss600217970 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss650224320 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss690229930 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss7310237720 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss850254090 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Smuss850254630 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss850254640 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss850254700 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss870256580 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss890258490 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Smuss9110263550 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |