Spirogloea muscicola (spirogloea_muscicola)

This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Download candidate protein FASTA for this species

Pathway Coverage

6 Pathways

Terpenoid pathway 33.87% Alkaloid pathway 26.04% Phenylpropanoid pathway 20.97% Steroid pathway 10.6% Rosmarinic acid pathway 4.61% Flavonoid pathway 3.92%

Family Distribution

1190 Family-Level Calls

BAHD 10.92% 4CL 10.84% NMT 6.05% POD 4.71% IFR 4.12% STR 3.7% GS 3.53% SMT1/SMT2/SMT3 2.94%

Other Families 53.19%

More Families (88)

CYP71 35 2.94% CSE 30 2.52% C3'H/CYP98A 30 2.52% C4H 28 2.35% CAD 22 1.85% CNMT 20 1.68% CYP76 20 1.68% TRI/TRII 19 1.6% SGD 16 1.34% AACT 15 1.26% IFS 14 1.18% FNS 13 1.09% CPR 13 1.09% T3O 11 0.92% PYKS 11 0.92% COR 11 0.92% DFR 10 0.84% CAS 10 0.84% SQS/FDFT1 10 0.84% BR6OX2/CYP85A2 10 0.84% DWF4/CYP90B1 10 0.84% MVK 10 0.84% F3H 9 0.76% TAT 9 0.76% GGPPS 9 0.76% SLS 8 0.67% CPD/CYP90A1 8 0.67% SMO1/SMO2 8 0.67% DET2 7 0.59% 8HGO 6 0.5% PMT 6 0.5% PAL 6 0.5% CHS 6 0.5% CCoAOMT 6 0.5% COMT 6 0.5% FPPS 6 0.5% MVD 6 0.5% IO 5 0.42% 6OMT_4OMT_SOMT 5 0.42% CHI 5 0.42% F3'5'H/CYP75A 5 0.42% LAC 5 0.42% RAS 5 0.42% HDR/IspH 5 0.42% CYP719 4 0.34% H6H 4 0.34% ISY 4 0.34% ANR 4 0.34% CCR 4 0.34% F5H/CYP84A 4 0.34% CYP51G1 4 0.34% HYD1 4 0.34% ODC 3 0.25% NCS 3 0.25% G8O/G8H 3 0.25% MPO 3 0.25% CODM/T6ODM 3 0.25% ADC 3 0.25% CYP80B1 3 0.25% T16H 3 0.25% TDC 3 0.25% F3'H/CYP75B 3 0.25% HPPR 3 0.25% DWF1 3 0.25% ROT3/CYP90C1 3 0.25% DWF7 3 0.25% FK 3 0.25% DWF5 3 0.25% CPI1 3 0.25% UGT 3 0.25% HDS/IspG 3 0.25% PMK 3 0.25% HMGR 3 0.25% HMGS 3 0.25% DXS 3 0.25% CMK/IspE 3 0.25% IDI 3 0.25% MDS/IspF 3 0.25% CYP80F1 2 0.17% XMT_MXMT_DXMT 2 0.17% 7DLGT 2 0.17% UFGT 2 0.17% BBE 1 0.08% LAMT 1 0.08% FLS 1 0.08% BR6OX1/CYP85A1 1 0.08% CYP90D1 1 0.08% GPPS 1 0.08%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Pathway-Level Records	Detected Families	Top family	Results
Terpenoid pathway	147	15	BAHD (83)	View species results
Alkaloid pathway	113	15	NMT (34)	View species results
Phenylpropanoid pathway	91	7	POD (48)	View species results
Steroid pathway	46	9	SMT1/SMT2/SMT3 (14)	View species results
Rosmarinic acid pathway	20	4	CPR (10)	View species results
Flavonoid pathway	17	6	4CL (4)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Detected families	Assignment calls	Included families
P450/oxygenase	23	215	BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	2	135	BAHD, RAS

Identification Result List

Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: NMT

Protein/Isoform Record	Pathway	Family	Confidence	Status	Best Target
Smuss1000006990	Alkaloid	NMT	low	borderline	NMT__00061__sp_Q9SAH5_PLMT_ARATH
Smuss110016990	Alkaloid	NMT	medium	pass	NMT__00023__sp_O82210_ANM12_ARATH
Smuss1120019190	Alkaloid	NMT	medium	pass	NMT__00040__sp_Q84WW6_ASHH1_ARATH
Smuss1160022740	Alkaloid	NMT	medium	pass	NMT__00035__sp_Q6K431_TRX1_ORYSJ
Smuss120027040	Alkaloid	NMT	medium	pass	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Smuss1220028590	Alkaloid	NMT	low	borderline	NMT__00023__sp_O82210_ANM12_ARATH
Smuss1280033400	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH
Smuss1290034230	Alkaloid	NMT	low	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Smuss1330040160	Alkaloid	NMT	low	borderline	NMT__00068__sp_Q9XI84_RBCMT_ARATH
Smuss1360041860	Alkaloid	NMT	low	borderline	NMT__00023__sp_O82210_ANM12_ARATH
Smuss1360042050	Alkaloid	NMT	medium	pass	NMT__00060__sp_Q9MAT5_ANM10_ARATH
Smuss1370042610	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
Smuss1380043310	Alkaloid	NMT	medium	pass	NMT__00039__sp_Q84W92_ANM13_ARATH
Smuss140045310	Alkaloid	NMT	low	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Smuss14120048370	Alkaloid	NMT	low	borderline	NMT__00019__sp_O22781_SUVH2_ARATH
Smuss1500055510	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Smuss150055320	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
Smuss1540057890	Alkaloid	NMT	medium	pass	NMT__00041__sp_Q8GWT4_ANM15_ARATH
Smuss1550058980	Alkaloid	NMT	medium	pass	NMT__00016__sp_F4JNX3_CMKMT_ARATH
Smuss1580060820	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Smuss160063390	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
Smuss1650066530	Alkaloid	NMT	medium	borderline	NMT__00015__sp_C8YTM5_PEAM2_WHEAT
Smuss1680068340	Alkaloid	NMT	low	borderline	NMT__00068__sp_Q9XI84_RBCMT_ARATH
Smuss1690069260	Alkaloid	NMT	medium	pass	NMT__00032__sp_Q5PP37_ATXR2_ARATH
Smuss170071110	Alkaloid	NMT	medium	pass	NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Smuss1830079950	Alkaloid	NMT	medium	pass	NMT__00032__sp_Q5PP37_ATXR2_ARATH
Smuss1850080770	Alkaloid	NMT	medium	pass	NMT__00066__sp_Q9SU94_ANM11_ARATH
Smuss20091010	Alkaloid	NMT	low	borderline	NMT__00017__sp_F4K1J4_ATXR7_ARATH
Smuss2050097250	Alkaloid	NMT	medium	pass	NMT__00040__sp_Q84WW6_ASHH1_ARATH
Smuss220104930	Alkaloid	NMT	medium	pass	NMT__00024__sp_P0CB22_ATX2_ARATH
Smuss220105500	Alkaloid	NMT	medium	borderline	NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Smuss2250108440	Alkaloid	NMT	medium	pass	NMT__00016__sp_F4JNX3_CMKMT_ARATH
Smuss2280109400	Alkaloid	NMT	medium	pass	NMT__00032__sp_Q5PP37_ATXR2_ARATH
Smuss230111330	Alkaloid	NMT	medium	pass	NMT__00041__sp_Q8GWT4_ANM15_ARATH
Smuss2450118550	Alkaloid	NMT	low	borderline	NMT__00020__sp_O23372_ATXR3_ARATH
Smuss2460118930	Alkaloid	NMT	medium	pass	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Smuss250120570	Alkaloid	NMT	medium	borderline	NMT__00050__sp_Q944H0_PEAM2_ARATH
Smuss2620127420	Alkaloid	NMT	medium	pass	NMT__00061__sp_Q9SAH5_PLMT_ARATH
Smuss30141980	Alkaloid	NMT	low	borderline	NMT__00017__sp_F4K1J4_ATXR7_ARATH
Smuss30143370	Alkaloid	NMT	low	borderline	NMT__00061__sp_Q9SAH5_PLMT_ARATH
Smuss3050147570	Alkaloid	NMT	medium	pass	NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Smuss340158450	Alkaloid	NMT	medium	pass	NMT__00040__sp_Q84WW6_ASHH1_ARATH
Smuss340159130	Alkaloid	NMT	medium	pass	NMT__00041__sp_Q8GWT4_ANM15_ARATH
Smuss350161800	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
Smuss3510162970	Alkaloid	NMT	low	borderline	NMT__00020__sp_O23372_ATXR3_ARATH
Smuss3710168710	Alkaloid	NMT	low	borderline	NMT__00020__sp_O23372_ATXR3_ARATH
Smuss380170900	Alkaloid	NMT	low	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Smuss3860171950	Alkaloid	NMT	medium	pass	NMT__00066__sp_Q9SU94_ANM11_ARATH
Smuss390173450	Alkaloid	NMT	low	borderline	NMT__00016__sp_F4JNX3_CMKMT_ARATH
Smuss400178070	Alkaloid	NMT	medium	pass	NMT__00025__sp_P93831_CLF_ARATH