PlantSME Plant secondary metabolism enzyme database

Takakia lepidozioides (takakia_lepidozioides)

Imported from atlas release summary for Takakia lepidozioides.

819
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 196 19 BAHD (75) View species results
Phenylpropanoid pathway 185 10 POD (75) View species results
Alkaloid pathway 172 17 7DLGT (34) View species results
Flavonoid pathway 116 8 UFGT (45) View species results
Rosmarinic acid pathway 108 7 C4H (46) View species results
Steroid pathway 42 12 CAS (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 826 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 129 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status Best Target
TlepHiC_scaffold_20030640 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
TlepHiC_scaffold_20038900 Flavonoid F3H low borderline F3H__00006__sp_Q7XZQ7_FL3H_PETCR
TlepHiC_scaffold_20056360 Flavonoid F3H medium borderline F3H__00005__sp_Q7XZQ6_FLS_PETCR
TlepHiC_scaffold_20056370 Flavonoid F3H medium borderline F3H__00005__sp_Q7XZQ6_FLS_PETCR
TlepHiC_scaffold_20063210 Flavonoid F3H medium borderline F3H__00009__sp_Q9ZWQ9_FLS_CITUN
TlepHiC_scaffold_20072990 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
TlepHiC_scaffold_20073000 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
TlepHiC_scaffold_20076710 Flavonoid F3H medium borderline F3H__00006__sp_Q7XZQ7_FL3H_PETCR
TlepHiC_scaffold_20078320 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
TlepHiC_scaffold_20078410 Flavonoid F3H medium borderline F3H__00009__sp_Q9ZWQ9_FLS_CITUN
TlepHiC_scaffold_20083130 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
TlepHiC_scaffold_20083200 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
TlepHiC_scaffold_40118030 Flavonoid F3H medium borderline F3H__00009__sp_Q9ZWQ9_FLS_CITUN
TlepHiC_scaffold_40124710 Flavonoid F3H medium pass F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
TlepHiC_scaffold_40127140 Flavonoid F3H medium pass F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
TlepHiC_scaffold_40127160 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
TlepHiC_scaffold_40127360 Flavonoid F3H medium borderline F3H__00006__sp_Q7XZQ7_FL3H_PETCR
TlepHiC_scaffold_40127860 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
TlepHiC_scaffold_40127900 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
TlepHiC_scaffold_40128340 Flavonoid F3H medium borderline F3H__00006__sp_Q7XZQ7_FL3H_PETCR
TlepHiC_scaffold_40155220 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
TlepHiC_scaffold_40165310 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
TlepHiC_scaffold_50183760 Flavonoid F3H medium borderline F3H__00009__sp_Q9ZWQ9_FLS_CITUN
TlepHiC_scaffold_50184170 Flavonoid F3H medium pass F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
TlepHiC_scaffold_50196310 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
TlepHiC_scaffold_60226960 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
TlepHiC_scaffold_60227050 Flavonoid F3H low borderline F3H__00003__sp_Q7XM21_FL3H1_ORYSJ