Takakia lepidozioides (takakia_lepidozioides)
Imported from atlas release summary for Takakia lepidozioides.
819
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
819
Candidate Genes
C4H
7.18%
C3'H/CYP98A
6.92%
PAL
4.99%
BAHD
4.99%
IFS
4.79%
CYP76
4.47%
POD
3.95%
4CL
3.33%
Other Families
59.37%
More Families (96)
T3O
61
3.17%
DWF4/CYP90B1
60
3.12%
NMT
58
3.02%
UGT
50
2.6%
UFGT
48
2.5%
7DLGT
45
2.34%
STR
41
2.13%
BR6OX2/CYP85A2
39
2.03%
F3'H/CYP75B
33
1.72%
IFR
30
1.56%
GS
29
1.51%
PYKS
27
1.4%
F3H
27
1.4%
COMT
23
1.2%
IO
22
1.14%
T16H
21
1.09%
CAD
21
1.09%
RAS
20
1.04%
CYP71
20
1.04%
TRI/TRII
19
0.99%
CYP90D1
18
0.94%
7DLH
17
0.88%
CODM/T6ODM
17
0.88%
SGD
15
0.78%
SLS
15
0.78%
CHS
15
0.78%
SMT1/SMT2/SMT3
15
0.78%
16OMT
13
0.68%
HCT
13
0.68%
CAS
13
0.68%
PMT
12
0.62%
H6H
12
0.62%
CSE
12
0.62%
BR6OX1/CYP85A1
11
0.57%
LAC
10
0.52%
ROT3/CYP90C1
10
0.52%
G8O/G8H
9
0.47%
8HGO
9
0.47%
FNS
9
0.47%
F3'5'H/CYP75A
9
0.47%
CYP719
8
0.42%
COR
7
0.36%
CNMT
7
0.36%
ANR
7
0.36%
CPD/CYP90A1
7
0.36%
NCS
6
0.31%
CYP80B1
6
0.31%
DFR
6
0.31%
CCR
6
0.31%
CYP51G1
6
0.31%
DET2
6
0.31%
SQS/FDFT1
6
0.31%
DXS
6
0.31%
AACT
6
0.31%
GES
5
0.26%
LAMT
5
0.26%
F5H/CYP84A
5
0.26%
CPR
5
0.26%
HYD1
5
0.26%
TDC
4
0.21%
ADC
4
0.21%
TAT
4
0.21%
DWF5
4
0.21%
GGPPS
4
0.21%
FPPS
4
0.21%
TPS
4
0.21%
TYDC_DDC
3
0.16%
BBE
3
0.16%
ANS/LDOX
3
0.16%
SMO1/SMO2
3
0.16%
DWF7
3
0.16%
MVD
3
0.16%
MVK
3
0.16%
CCoAOMT
2
0.1%
DWF1
2
0.1%
FK
2
0.1%
MDS/IspF
2
0.1%
HMGR
2
0.1%
PMK
2
0.1%
ISY
1
0.05%
ODC
1
0.05%
6OMT_4OMT_SOMT
1
0.05%
MPO
1
0.05%
XMT_MXMT_DXMT
1
0.05%
FLS
1
0.05%
CHI
1
0.05%
HPPR
1
0.05%
CPI1
1
0.05%
SQE
1
0.05%
DXR
1
0.05%
MCT/IspD
1
0.05%
CMK/IspE
1
0.05%
HDS/IspG
1
0.05%
HDR/IspH
1
0.05%
HMGS
1
0.05%
IDI
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 196 | 19 | BAHD (75) | View species results |
| Phenylpropanoid pathway | 185 | 10 | POD (75) | View species results |
| Alkaloid pathway | 172 | 17 | 7DLGT (34) | View species results |
| Flavonoid pathway | 116 | 8 | UFGT (45) | View species results |
| Rosmarinic acid pathway | 108 | 7 | C4H (46) | View species results |
| Steroid pathway | 42 | 12 | CAS (12) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 826 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 129 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| TlepHiC_scaffold_10011390 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_20023140 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_20023540 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_20024110 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_20038910 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| TlepHiC_scaffold_20041080 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_20061800 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| TlepHiC_scaffold_20061810 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| TlepHiC_scaffold_20064280 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_20074280 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_20086630 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_20086640 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_20090110 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| TlepHiC_scaffold_20091580 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_40094900 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_40101720 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_40106900 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_40107520 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_40107580 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_40107620 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_40109930 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_40114750 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_40119740 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_40128000 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_40128070 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_40128080 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_40128130 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_40128220 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_40130000 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_40140210 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_40158630 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_40168700 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| TlepHiC_scaffold_50186600 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_50186660 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_50197950 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| TlepHiC_scaffold_50201740 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_50216210 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_50220000 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_60228270 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_60230090 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| TlepHiC_scaffold_60242830 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |