PlantSME Plant secondary metabolism enzyme database

Takakia lepidozioides (takakia_lepidozioides)

Imported from atlas release summary for Takakia lepidozioides.

819
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 196 19 BAHD (75) View species results
Phenylpropanoid pathway 185 10 POD (75) View species results
Alkaloid pathway 172 17 7DLGT (34) View species results
Flavonoid pathway 116 8 UFGT (45) View species results
Rosmarinic acid pathway 108 7 C4H (46) View species results
Steroid pathway 42 12 CAS (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 826 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 129 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
TlepHiC_scaffold_60231060 Alkaloid GES low borderline
TlepHiC_scaffold_10006980 Alkaloid GS low borderline
TlepHiC_scaffold_20043500 Alkaloid GS high pass
TlepHiC_scaffold_20070130 Alkaloid GS low borderline
TlepHiC_scaffold_20072430 Alkaloid GS medium pass
TlepHiC_scaffold_20077460 Alkaloid GS low borderline
TlepHiC_scaffold_20079420 Alkaloid GS high pass
TlepHiC_scaffold_20080990 Alkaloid GS low borderline
TlepHiC_scaffold_20081120 Alkaloid GS low borderline
TlepHiC_scaffold_40097210 Alkaloid GS low borderline
TlepHiC_scaffold_40111080 Alkaloid GS high pass
TlepHiC_scaffold_40118820 Alkaloid GS low borderline
TlepHiC_scaffold_40125540 Alkaloid GS medium pass
TlepHiC_scaffold_40128120 Alkaloid GS low borderline
TlepHiC_scaffold_40128370 Alkaloid GS low borderline
TlepHiC_scaffold_40139850 Alkaloid GS low borderline
TlepHiC_scaffold_40160200 Alkaloid GS high pass
TlepHiC_scaffold_50181170 Alkaloid GS low borderline
TlepHiC_scaffold_50184070 Alkaloid GS low borderline
TlepHiC_scaffold_50184960 Alkaloid GS low borderline
TlepHiC_scaffold_50193150 Alkaloid GS low borderline
TlepHiC_scaffold_50195250 Alkaloid GS high pass
TlepHiC_scaffold_50195350 Alkaloid GS high pass
TlepHiC_scaffold_50195950 Alkaloid GS low borderline
TlepHiC_scaffold_50211080 Alkaloid GS low borderline
TlepHiC_scaffold_50212320 Alkaloid GS low borderline
TlepHiC_scaffold_60236510 Alkaloid GS low borderline
TlepHiC_scaffold_60236550 Alkaloid GS low borderline
TlepHiC_scaffold_60238370 Alkaloid GS high pass
TlepHiC_scaffold_60240490 Alkaloid GS high pass
TlepHiC_scaffold_20038900 Alkaloid H6H low borderline
TlepHiC_scaffold_20063210 Alkaloid H6H medium borderline
TlepHiC_scaffold_20076710 Alkaloid H6H medium borderline
TlepHiC_scaffold_20078320 Alkaloid H6H medium borderline
TlepHiC_scaffold_20083200 Alkaloid H6H medium borderline
TlepHiC_scaffold_40127360 Alkaloid H6H medium borderline
TlepHiC_scaffold_40127860 Alkaloid H6H medium borderline
TlepHiC_scaffold_40127900 Alkaloid H6H medium borderline
TlepHiC_scaffold_40165310 Alkaloid H6H high pass
TlepHiC_scaffold_50183760 Alkaloid H6H medium borderline
TlepHiC_scaffold_50184170 Alkaloid H6H medium pass
TlepHiC_scaffold_50196310 Alkaloid H6H medium borderline
TlepHiC_scaffold_20026420 Alkaloid IO low borderline
TlepHiC_scaffold_20031510 Alkaloid IO medium borderline
TlepHiC_scaffold_20035540 Alkaloid IO medium borderline
TlepHiC_scaffold_20080030 Alkaloid IO medium borderline
TlepHiC_scaffold_20080060 Alkaloid IO medium borderline
TlepHiC_scaffold_20081460 Alkaloid IO medium borderline
TlepHiC_scaffold_40108700 Alkaloid IO medium borderline
TlepHiC_scaffold_40108710 Alkaloid IO medium borderline