Takakia lepidozioides (takakia_lepidozioides)
Imported from atlas release summary for Takakia lepidozioides.
932
Candidate Protein Records
819
Pathway-Level Records
1922
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1922
Family-Level Calls
C4H
7.18%
C3'H/CYP98A
6.92%
PAL
4.99%
BAHD
4.99%
IFS
4.79%
CYP76
4.47%
POD
3.95%
4CL
3.33%
Other Families
59.37%
More Families (96)
T3O
61
3.17%
DWF4/CYP90B1
60
3.12%
NMT
58
3.02%
UGT
50
2.6%
UFGT
48
2.5%
7DLGT
45
2.34%
STR
41
2.13%
BR6OX2/CYP85A2
39
2.03%
F3'H/CYP75B
33
1.72%
IFR
30
1.56%
GS
29
1.51%
PYKS
27
1.4%
F3H
27
1.4%
COMT
23
1.2%
IO
22
1.14%
T16H
21
1.09%
CAD
21
1.09%
RAS
20
1.04%
CYP71
20
1.04%
TRI/TRII
19
0.99%
CYP90D1
18
0.94%
7DLH
17
0.88%
CODM/T6ODM
17
0.88%
SGD
15
0.78%
SLS
15
0.78%
CHS
15
0.78%
SMT1/SMT2/SMT3
15
0.78%
16OMT
13
0.68%
HCT
13
0.68%
CAS
13
0.68%
PMT
12
0.62%
H6H
12
0.62%
CSE
12
0.62%
BR6OX1/CYP85A1
11
0.57%
LAC
10
0.52%
ROT3/CYP90C1
10
0.52%
G8O/G8H
9
0.47%
8HGO
9
0.47%
FNS
9
0.47%
F3'5'H/CYP75A
9
0.47%
CYP719
8
0.42%
COR
7
0.36%
CNMT
7
0.36%
ANR
7
0.36%
CPD/CYP90A1
7
0.36%
NCS
6
0.31%
CYP80B1
6
0.31%
DFR
6
0.31%
CCR
6
0.31%
CYP51G1
6
0.31%
DET2
6
0.31%
SQS/FDFT1
6
0.31%
DXS
6
0.31%
AACT
6
0.31%
GES
5
0.26%
LAMT
5
0.26%
F5H/CYP84A
5
0.26%
CPR
5
0.26%
HYD1
5
0.26%
TDC
4
0.21%
ADC
4
0.21%
TAT
4
0.21%
DWF5
4
0.21%
GGPPS
4
0.21%
FPPS
4
0.21%
TPS
4
0.21%
TYDC_DDC
3
0.16%
BBE
3
0.16%
ANS/LDOX
3
0.16%
SMO1/SMO2
3
0.16%
DWF7
3
0.16%
MVD
3
0.16%
MVK
3
0.16%
CCoAOMT
2
0.1%
DWF1
2
0.1%
FK
2
0.1%
MDS/IspF
2
0.1%
HMGR
2
0.1%
PMK
2
0.1%
ISY
1
0.05%
ODC
1
0.05%
6OMT_4OMT_SOMT
1
0.05%
MPO
1
0.05%
XMT_MXMT_DXMT
1
0.05%
FLS
1
0.05%
CHI
1
0.05%
HPPR
1
0.05%
CPI1
1
0.05%
SQE
1
0.05%
DXR
1
0.05%
MCT/IspD
1
0.05%
CMK/IspE
1
0.05%
HDS/IspG
1
0.05%
HDR/IspH
1
0.05%
HMGS
1
0.05%
IDI
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 196 | 19 | BAHD (75) | View species results |
| Phenylpropanoid pathway | 185 | 10 | POD (75) | View species results |
| Alkaloid pathway | 172 | 17 | 7DLGT (34) | View species results |
| Flavonoid pathway | 116 | 8 | UFGT (45) | View species results |
| Rosmarinic acid pathway | 108 | 7 | C4H (46) | View species results |
| Steroid pathway | 42 | 12 | CAS (12) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 826 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 129 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| TlepHiC_scaffold_20077200 | Alkaloid | NMT | low | borderline |
| TlepHiC_scaffold_20077650 | Alkaloid | NMT | medium | borderline |
| TlepHiC_scaffold_20077710 | Alkaloid | NMT | medium | borderline |
| TlepHiC_scaffold_20091390 | Alkaloid | NMT | low | borderline |
| TlepHiC_scaffold_20091710 | Alkaloid | NMT | low | borderline |
| TlepHiC_scaffold_20093540 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_40102960 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_40109280 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_40116800 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_40118440 | Alkaloid | NMT | low | borderline |
| TlepHiC_scaffold_40123440 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_40130560 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_40137480 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_40140850 | Alkaloid | NMT | low | borderline |
| TlepHiC_scaffold_40151870 | Alkaloid | NMT | medium | borderline |
| TlepHiC_scaffold_40156920 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_40158660 | Alkaloid | NMT | medium | borderline |
| TlepHiC_scaffold_50175010 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_50180970 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_50181070 | Alkaloid | NMT | medium | borderline |
| TlepHiC_scaffold_50182500 | Alkaloid | NMT | medium | borderline |
| TlepHiC_scaffold_50188810 | Alkaloid | NMT | medium | borderline |
| TlepHiC_scaffold_50194780 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_50195030 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_50198320 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_50202310 | Alkaloid | NMT | low | borderline |
| TlepHiC_scaffold_50202580 | Alkaloid | NMT | low | borderline |
| TlepHiC_scaffold_60221420 | Alkaloid | NMT | low | borderline |
| TlepHiC_scaffold_60222360 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_60222370 | Alkaloid | NMT | low | borderline |
| TlepHiC_scaffold_60238670 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_60238680 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_60239680 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_60242450 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_60248090 | Alkaloid | NMT | medium | pass |
| TlepHiC_scaffold_40122040 | Alkaloid | ODC | medium | pass |
| TlepHiC_scaffold_20024050 | Alkaloid | PMT | low | borderline |
| TlepHiC_scaffold_20035950 | Alkaloid | PMT | low | borderline |
| TlepHiC_scaffold_20061950 | Alkaloid | PMT | medium | pass |
| TlepHiC_scaffold_40106770 | Alkaloid | PMT | medium | borderline |
| TlepHiC_scaffold_40155300 | Alkaloid | PMT | low | borderline |
| TlepHiC_scaffold_40156360 | Alkaloid | PMT | low | borderline |
| TlepHiC_scaffold_40159840 | Alkaloid | PMT | low | borderline |
| TlepHiC_scaffold_40161770 | Alkaloid | PMT | low | borderline |
| TlepHiC_scaffold_40162980 | Alkaloid | PMT | low | borderline |
| TlepHiC_scaffold_40162990 | Alkaloid | PMT | low | borderline |
| TlepHiC_scaffold_50206760 | Alkaloid | PMT | low | borderline |
| TlepHiC_scaffold_50208240 | Alkaloid | PMT | low | borderline |
| TlepHiC_scaffold_20029760 | Alkaloid | PYKS | low | borderline |
| TlepHiC_scaffold_20030040 | Alkaloid | PYKS | low | borderline |