Tamarix chinensis (tamarix_chinensis)
Imported from atlas release summary for Tamarix chinensis.
1027
Candidate Protein Records
836
Pathway-Level Records
1939
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1939
Family-Level Calls
BAHD
6.7%
C3'H/CYP98A
5.47%
POD
5.16%
C4H
5.11%
4CL
4.33%
IFS
3.66%
NMT
3.3%
7DLGT
3.3%
Other Families
62.97%
More Families (95)
UFGT
64
3.3%
UGT
64
3.3%
CYP76
63
3.25%
T3O
56
2.89%
F3H
52
2.68%
DWF4/CYP90B1
49
2.53%
STR
44
2.27%
SMT1/SMT2/SMT3
35
1.81%
LAC
31
1.6%
CAD
30
1.55%
TRI/TRII
28
1.44%
PYKS
27
1.39%
IFR
27
1.39%
H6H
26
1.34%
CODM/T6ODM
26
1.34%
F3'H/CYP75B
26
1.34%
BR6OX2/CYP85A2
23
1.19%
CSE
22
1.13%
CAS
21
1.08%
COMT
20
1.03%
ANR
19
0.98%
GS
18
0.93%
HCT
17
0.88%
CYP71
17
0.88%
GES
16
0.83%
G8O/G8H
16
0.83%
RAS
16
0.83%
CYP90D1
16
0.83%
TPS
16
0.83%
T16H
15
0.77%
PMT
15
0.77%
7DLH
15
0.77%
F3'5'H/CYP75A
15
0.77%
CCR
13
0.67%
TAT
13
0.67%
SLS
12
0.62%
CPD/CYP90A1
11
0.57%
8HGO
10
0.52%
IO
9
0.46%
SGD
9
0.46%
16OMT
9
0.46%
CHS
9
0.46%
PAL
9
0.46%
CCoAOMT
9
0.46%
NCS
7
0.36%
BBE
7
0.36%
CPR
7
0.36%
TYDC_DDC
6
0.31%
LAMT
6
0.31%
COR
6
0.31%
ANS/LDOX
6
0.31%
CYP51G1
6
0.31%
AACT
6
0.31%
CNMT
5
0.26%
BR6OX1/CYP85A1
5
0.26%
GGPPS
5
0.26%
ISY
4
0.21%
FNS
4
0.21%
DFR
4
0.21%
F5H/CYP84A
4
0.21%
HPPR
4
0.21%
SMO1/SMO2
4
0.21%
ROT3/CYP90C1
4
0.21%
DET2
4
0.21%
MVK
4
0.21%
FPPS
4
0.21%
MVD
4
0.21%
HMGR
4
0.21%
MPO
3
0.15%
DWF1
3
0.15%
SQS/FDFT1
3
0.15%
DXS
3
0.15%
PMK
3
0.15%
CHI
2
0.1%
SQE
2
0.1%
DWF7
2
0.1%
CMK/IspE
2
0.1%
MCT/IspD
2
0.1%
HDR/IspH
2
0.1%
CYP80B1
1
0.05%
TDC
1
0.05%
CYP719
1
0.05%
6OMT_4OMT_SOMT
1
0.05%
ADC
1
0.05%
ODC
1
0.05%
FLS
1
0.05%
HYD1
1
0.05%
FK
1
0.05%
CPI1
1
0.05%
DWF5
1
0.05%
HDS/IspG
1
0.05%
MDS/IspF
1
0.05%
HMGS
1
0.05%
IDI
1
0.05%
DXR
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 226 | 19 | BAHD (101) | View species results |
| Phenylpropanoid pathway | 209 | 12 | POD (98) | View species results |
| Alkaloid pathway | 182 | 17 | NMT (34) | View species results |
| Flavonoid pathway | 106 | 10 | UFGT (61) | View species results |
| Rosmarinic acid pathway | 59 | 7 | C4H (17) | View species results |
| Steroid pathway | 54 | 11 | SMT1/SMT2/SMT3 (21) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 640 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 163 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| tamarix_chinensis_TC08G2121T1 | Alkaloid | PYKS | high | pass |
| tamarix_chinensis_TC08G2123T1 | Alkaloid | PYKS | high | pass |
| tamarix_chinensis_TC09G2369T1 | Alkaloid | PYKS | low | borderline |
| tamarix_chinensis_TC10G0066T1 | Alkaloid | PYKS | high | pass |
| tamarix_chinensis_TC10G0459T1 | Alkaloid | PYKS | high | pass |
| tamarix_chinensis_TC10G0467T1 | Alkaloid | PYKS | low | borderline |
| tamarix_chinensis_TC10G0559T1 | Alkaloid | PYKS | low | borderline |
| tamarix_chinensis_TC10G0589T1 | Alkaloid | PYKS | low | borderline |
| tamarix_chinensis_TC02G2115T1 | Alkaloid | SGD | medium | pass |
| tamarix_chinensis_TC02G3758T1 | Alkaloid | SGD | medium | pass |
| tamarix_chinensis_TC05G1033T1 | Alkaloid | SGD | medium | pass |
| tamarix_chinensis_TC05G1034T1 | Alkaloid | SGD | medium | pass |
| tamarix_chinensis_TC05G2081T1 | Alkaloid | SGD | medium | pass |
| tamarix_chinensis_TC05G2085T1 | Alkaloid | SGD | medium | pass |
| tamarix_chinensis_TC06G1061T1 | Alkaloid | SGD | medium | pass |
| tamarix_chinensis_TC06G1391T1 | Alkaloid | SGD | low | borderline |
| tamarix_chinensis_TC08G0205T1 | Alkaloid | SGD | medium | pass |
| tamarix_chinensis_TC04G0327T1 | Alkaloid | SLS | medium | borderline |
| tamarix_chinensis_TC05G1159T1 | Alkaloid | SLS | medium | borderline |
| tamarix_chinensis_TC05G1303T1 | Alkaloid | SLS | medium | borderline |
| tamarix_chinensis_TC05G1304T1 | Alkaloid | SLS | medium | borderline |
| tamarix_chinensis_TC07G0144T1 | Alkaloid | SLS | medium | borderline |
| tamarix_chinensis_TC08G0666T1 | Alkaloid | SLS | medium | borderline |
| tamarix_chinensis_TC08G2149T1 | Alkaloid | SLS | medium | borderline |
| tamarix_chinensis_TC10G1661T1 | Alkaloid | SLS | medium | borderline |
| tamarix_chinensis_TC11G1043T1 | Alkaloid | SLS | medium | borderline |
| tamarix_chinensis_TC11G1045T1 | Alkaloid | SLS | medium | borderline |
| tamarix_chinensis_TC11G1046T1 | Alkaloid | SLS | medium | borderline |
| tamarix_chinensis_TC11G1050T1 | Alkaloid | SLS | medium | borderline |
| tamarix_chinensis_TC01G1228T1 | Alkaloid | STR | medium | pass |
| tamarix_chinensis_TC01G1603T1 | Alkaloid | STR | low | borderline |
| tamarix_chinensis_TC01G1607T1 | Alkaloid | STR | medium | pass |
| tamarix_chinensis_TC01G1610T1 | Alkaloid | STR | low | borderline |
| tamarix_chinensis_TC01G1643T1 | Alkaloid | STR | low | borderline |
| tamarix_chinensis_TC01G2067T1 | Alkaloid | STR | low | borderline |
| tamarix_chinensis_TC01G2595T1 | Alkaloid | STR | low | borderline |
| tamarix_chinensis_TC02G1765T1 | Alkaloid | STR | low | borderline |
| tamarix_chinensis_TC02G2506T1 | Alkaloid | STR | low | borderline |
| tamarix_chinensis_TC02G2632T1 | Alkaloid | STR | medium | pass |
| tamarix_chinensis_TC02G2921T1 | Alkaloid | STR | low | borderline |
| tamarix_chinensis_TC02G3509T1 | Alkaloid | STR | medium | pass |
| tamarix_chinensis_TC03G2360T1 | Alkaloid | STR | medium | pass |
| tamarix_chinensis_TC03G2844T1 | Alkaloid | STR | low | borderline |
| tamarix_chinensis_TC05G2133T1 | Alkaloid | STR | low | borderline |
| tamarix_chinensis_TC05G2134T1 | Alkaloid | STR | low | borderline |
| tamarix_chinensis_TC05G2728T1 | Alkaloid | STR | low | borderline |
| tamarix_chinensis_TC06G0372T1 | Alkaloid | STR | low | borderline |
| tamarix_chinensis_TC06G1306T1 | Alkaloid | STR | medium | pass |
| tamarix_chinensis_TC06G2301T1 | Alkaloid | STR | low | borderline |
| tamarix_chinensis_TC06G2474T1 | Alkaloid | STR | low | borderline |