Tetraphis pellucida (tetraphis_pellucida)
Imported from atlas release summary for Tetraphis pellucida.
693
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
693
Candidate Genes
C4H
6.42%
POD
6.08%
C3'H/CYP98A
5.97%
NMT
5.23%
BAHD
4.95%
CYP76
4.28%
4CL
4.05%
IFS
3.6%
Other Families
59.43%
More Families (95)
UGT
52
2.93%
PAL
51
2.87%
UFGT
50
2.81%
7DLGT
49
2.76%
T3O
46
2.59%
F3H
46
2.59%
BR6OX2/CYP85A2
44
2.48%
STR
42
2.36%
IFR
38
2.14%
GS
32
1.8%
DWF4/CYP90B1
29
1.63%
CODM/T6ODM
28
1.58%
H6H
24
1.35%
F3'H/CYP75B
22
1.24%
T16H
21
1.18%
PYKS
21
1.18%
SMT1/SMT2/SMT3
19
1.07%
CYP71
18
1.01%
CAD
17
0.96%
SLS
16
0.9%
CPD/CYP90A1
16
0.9%
IO
15
0.84%
RAS
15
0.84%
F3'5'H/CYP75A
14
0.79%
TRI/TRII
13
0.73%
SGD
13
0.73%
HCT
13
0.73%
FNS
12
0.68%
COMT
12
0.68%
CAS
12
0.68%
7DLH
11
0.62%
CHS
11
0.62%
LAC
11
0.62%
CSE
11
0.62%
CNMT
9
0.51%
G8O/G8H
9
0.51%
ANR
9
0.51%
CCR
8
0.45%
DWF5
8
0.45%
ROT3/CYP90C1
8
0.45%
NCS
7
0.39%
COR
7
0.39%
DFR
7
0.39%
CYP90D1
6
0.34%
AACT
6
0.34%
PMT
5
0.28%
8HGO
5
0.28%
16OMT
5
0.28%
SMO1/SMO2
5
0.28%
ANS/LDOX
4
0.23%
CPR
4
0.23%
SQS/FDFT1
4
0.23%
BR6OX1/CYP85A1
4
0.23%
DET2
4
0.23%
GGPPS
4
0.23%
TPS
4
0.23%
MVK
4
0.23%
BBE
3
0.17%
TDC
3
0.17%
ADC
3
0.17%
ISY
3
0.17%
MPO
3
0.17%
CYP80B1
3
0.17%
CHI
3
0.17%
F5H/CYP84A
3
0.17%
TAT
3
0.17%
CYP51G1
3
0.17%
HYD1
3
0.17%
HMGR
3
0.17%
DXS
3
0.17%
6OMT_4OMT_SOMT
2
0.11%
LAMT
2
0.11%
CYP719
2
0.11%
CCoAOMT
2
0.11%
DWF1
2
0.11%
SQE
2
0.11%
PMK
2
0.11%
MVD
2
0.11%
HMGS
2
0.11%
IDI
2
0.11%
DXR
2
0.11%
FPPS
2
0.11%
TYDC_DDC
1
0.06%
ODC
1
0.06%
GES
1
0.06%
FLS
1
0.06%
HPPR
1
0.06%
FK
1
0.06%
DWF7
1
0.06%
CPI1
1
0.06%
HDS/IspG
1
0.06%
MCT/IspD
1
0.06%
CMK/IspE
1
0.06%
HDR/IspH
1
0.06%
MDS/IspF
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 178 | 10 | POD (102) | View species results |
| Terpenoid pathway | 165 | 19 | BAHD (61) | View species results |
| Alkaloid pathway | 140 | 19 | 7DLGT (33) | View species results |
| Flavonoid pathway | 102 | 8 | UFGT (47) | View species results |
| Rosmarinic acid pathway | 68 | 7 | C4H (27) | View species results |
| Steroid pathway | 40 | 14 | CAS (10) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 650 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 116 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Tpelscaffold_10000940 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Tpelscaffold_10007760 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Tpelscaffold_10015350 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Tpelscaffold_10018860 | Terpenoid | CYP76 | low | borderline | CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT |
| Tpelscaffold_20023860 | Terpenoid | CYP76 | low | borderline | CYP76__00018__sp_Q69X58_C76M7_ORYSJ |
| Tpelscaffold_20025130 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Tpelscaffold_20030040 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Tpelscaffold_20030050 | Terpenoid | CYP76 | medium | pass | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| Tpelscaffold_20030090 | Terpenoid | CYP76 | medium | pass | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| Tpelscaffold_20037780 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Tpelscaffold_30049580 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Tpelscaffold_30054800 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Tpelscaffold_30055210 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Tpelscaffold_30055930 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Tpelscaffold_30057180 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Tpelscaffold_30057210 | Terpenoid | CYP76 | medium | pass | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| Tpelscaffold_30063550 | Terpenoid | CYP76 | low | borderline | CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI |
| Tpelscaffold_40072880 | Terpenoid | CYP76 | low | borderline | CYP76__00007__sp_A0A1D8QMD2_C76K7_ROSOF |
| Tpelscaffold_40073230 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Tpelscaffold_40075430 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Tpelscaffold_40078780 | Terpenoid | CYP76 | low | borderline | CYP76__00017__sp_Q14T82_C76B9_PETHY |
| Tpelscaffold_40080070 | Terpenoid | CYP76 | medium | borderline | CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF |
| Tpelscaffold_40083320 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Tpelscaffold_40090530 | Terpenoid | CYP76 | medium | pass | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Tpelscaffold_40092600 | Terpenoid | CYP76 | medium | pass | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Tpelscaffold_40096450 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Tpelscaffold_40097870 | Terpenoid | CYP76 | low | borderline | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| Tpelscaffold_50104850 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Tpelscaffold_50105630 | Terpenoid | CYP76 | low | borderline | CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF |
| Tpelscaffold_50105820 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Tpelscaffold_50107990 | Terpenoid | CYP76 | low | borderline | CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM |
| Tpelscaffold_50108590 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Tpelscaffold_50110680 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Tpelscaffold_50117070 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Tpelscaffold_50123030 | Terpenoid | CYP76 | low | borderline | CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT |
| Tpelscaffold_50126060 | Terpenoid | CYP76 | medium | borderline | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| Tpelscaffold_50126450 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Tpelscaffold_50126460 | Terpenoid | CYP76 | medium | pass | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Tpelscaffold_50127260 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Tpelscaffold_50127400 | Terpenoid | CYP76 | medium | pass | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| Tpelscaffold_60134380 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Tpelscaffold_60135770 | Terpenoid | CYP76 | medium | pass | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| Tpelscaffold_60135790 | Terpenoid | CYP76 | medium | pass | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| Tpelscaffold_60142650 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Tpelscaffold_60144120 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Tpelscaffold_60144130 | Terpenoid | CYP76 | low | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Tpelscaffold_60144140 | Terpenoid | CYP76 | medium | pass | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Tpelscaffold_60145040 | Terpenoid | CYP76 | medium | pass | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| Tpelscaffold_60145050 | Terpenoid | CYP76 | medium | pass | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Tpelscaffold_60145060 | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |