PlantSME Plant secondary metabolism enzyme database

Tetraphis pellucida (tetraphis_pellucida)

Imported from atlas release summary for Tetraphis pellucida.

693
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 178 10 POD (102) View species results
Terpenoid pathway 165 19 BAHD (61) View species results
Alkaloid pathway 140 19 7DLGT (33) View species results
Flavonoid pathway 102 8 UFGT (47) View species results
Rosmarinic acid pathway 68 7 C4H (27) View species results
Steroid pathway 40 14 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 650 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Tpelscaffold_10000940 Alkaloid T3O medium borderline
Tpelscaffold_10002140 Alkaloid T3O medium pass
Tpelscaffold_10012110 Alkaloid T3O medium pass
Tpelscaffold_10014960 Alkaloid T3O low borderline
Tpelscaffold_10015350 Alkaloid T3O medium borderline
Tpelscaffold_10017470 Alkaloid T3O medium pass
Tpelscaffold_160023020 Alkaloid T3O medium pass
Tpelscaffold_20025520 Alkaloid T3O medium pass
Tpelscaffold_20044370 Alkaloid T3O low borderline
Tpelscaffold_30054800 Alkaloid T3O medium borderline
Tpelscaffold_30055210 Alkaloid T3O medium borderline
Tpelscaffold_30057210 Alkaloid T3O medium borderline
Tpelscaffold_30059710 Alkaloid T3O medium pass
Tpelscaffold_30059730 Alkaloid T3O medium pass
Tpelscaffold_30063550 Alkaloid T3O medium pass
Tpelscaffold_40072880 Alkaloid T3O medium pass
Tpelscaffold_40073230 Alkaloid T3O medium borderline
Tpelscaffold_40080070 Alkaloid T3O medium borderline
Tpelscaffold_40080300 Alkaloid T3O low borderline
Tpelscaffold_40093820 Alkaloid T3O medium pass
Tpelscaffold_40093830 Alkaloid T3O medium pass
Tpelscaffold_40096450 Alkaloid T3O medium borderline
Tpelscaffold_40097870 Alkaloid T3O high pass
Tpelscaffold_50104850 Alkaloid T3O medium borderline
Tpelscaffold_50105820 Alkaloid T3O medium borderline
Tpelscaffold_50110680 Alkaloid T3O medium borderline
Tpelscaffold_50115410 Alkaloid T3O low borderline
Tpelscaffold_50127050 Alkaloid T3O medium pass
Tpelscaffold_60134380 Alkaloid T3O medium borderline
Tpelscaffold_60145010 Alkaloid T3O low borderline
Tpelscaffold_60147000 Alkaloid T3O medium pass
Tpelscaffold_70151560 Alkaloid T3O medium borderline
Tpelscaffold_70165700 Alkaloid T3O medium borderline
Tpelscaffold_70168060 Alkaloid T3O low borderline
Tpelscaffold_70172370 Alkaloid T3O medium borderline
Tpelscaffold_80179340 Alkaloid T3O medium borderline
Tpelscaffold_80179380 Alkaloid T3O medium borderline
Tpelscaffold_80179390 Alkaloid T3O medium borderline
Tpelscaffold_80182790 Alkaloid T3O low borderline
Tpelscaffold_80184220 Alkaloid T3O medium borderline
Tpelscaffold_80200300 Alkaloid T3O medium pass
Tpelscaffold_90208880 Alkaloid T3O medium pass
Tpelscaffold_90213450 Alkaloid T3O medium pass
Tpelscaffold_90213460 Alkaloid T3O medium pass
Tpelscaffold_90220600 Alkaloid T3O medium borderline
Tpelscaffold_90226010 Alkaloid T3O medium pass