PlantSME Plant secondary metabolism enzyme database

Tetraphis pellucida (tetraphis_pellucida)

Imported from atlas release summary for Tetraphis pellucida.

693
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 178 10 POD (102) View species results
Terpenoid pathway 165 19 BAHD (61) View species results
Alkaloid pathway 140 19 7DLGT (33) View species results
Flavonoid pathway 102 8 UFGT (47) View species results
Rosmarinic acid pathway 68 7 C4H (27) View species results
Steroid pathway 40 14 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 650 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Tpelscaffold_10005490 Flavonoid 4CL medium pass
Tpelscaffold_10019380 Flavonoid 4CL medium pass
Tpelscaffold_20023960 Flavonoid 4CL low borderline
Tpelscaffold_20029660 Flavonoid 4CL medium pass
Tpelscaffold_20039010 Flavonoid 4CL medium pass
Tpelscaffold_20043220 Flavonoid 4CL low borderline
Tpelscaffold_40089220 Flavonoid 4CL low borderline
Tpelscaffold_40089830 Flavonoid 4CL low borderline
Tpelscaffold_50112200 Flavonoid 4CL low borderline
Tpelscaffold_50114020 Flavonoid 4CL low borderline
Tpelscaffold_50115060 Flavonoid 4CL medium pass
Tpelscaffold_50129300 Flavonoid 4CL low borderline
Tpelscaffold_50129610 Flavonoid 4CL medium pass
Tpelscaffold_60148350 Flavonoid 4CL low borderline
Tpelscaffold_70168870 Flavonoid 4CL medium pass
Tpelscaffold_70169440 Flavonoid 4CL low borderline
Tpelscaffold_80178240 Flavonoid 4CL low borderline
Tpelscaffold_80194690 Flavonoid 4CL low borderline
Tpelscaffold_80194920 Flavonoid 4CL low borderline
Tpelscaffold_80202530 Flavonoid 4CL medium pass
Tpelscaffold_90218200 Flavonoid 4CL medium pass
Tpelscaffold_90219450 Flavonoid 4CL low borderline
Tpelscaffold_90221990 Flavonoid 4CL low borderline
Tpelscaffold_90228530 Flavonoid 4CL medium pass
Tpelscaffold_200045330 Flavonoid ANR medium borderline
Tpelscaffold_20032500 Flavonoid ANR medium borderline
Tpelscaffold_20043810 Flavonoid ANR medium borderline
Tpelscaffold_40075100 Flavonoid ANR medium borderline
Tpelscaffold_40075110 Flavonoid ANR medium borderline
Tpelscaffold_70169260 Flavonoid ANR medium borderline
Tpelscaffold_80189820 Flavonoid ANR medium borderline
Tpelscaffold_90212850 Flavonoid ANR medium borderline
Tpelscaffold_90212860 Flavonoid ANR medium borderline
Tpelscaffold_10015760 Flavonoid ANS/LDOX medium borderline
Tpelscaffold_40087590 Flavonoid ANS/LDOX low borderline
Tpelscaffold_50126870 Flavonoid ANS/LDOX low borderline
Tpelscaffold_90209130 Flavonoid ANS/LDOX medium borderline
Tpelscaffold_10018860 Flavonoid C4H low borderline
Tpelscaffold_50107990 Flavonoid C4H medium borderline
Tpelscaffold_70156310 Flavonoid C4H medium borderline
Tpelscaffold_70157850 Flavonoid C4H medium borderline
Tpelscaffold_80200220 Flavonoid C4H medium borderline
Tpelscaffold_90220270 Flavonoid C4H medium borderline
Tpelscaffold_90220600 Flavonoid C4H medium borderline
Tpelscaffold_60147200 Flavonoid CHI medium pass
Tpelscaffold_60147900 Flavonoid CHI low borderline
Tpelscaffold_70153250 Flavonoid CHI medium pass
Tpelscaffold_20026190 Flavonoid CHS medium pass
Tpelscaffold_20038900 Flavonoid CHS medium pass
Tpelscaffold_20038910 Flavonoid CHS medium pass