Tetraphis pellucida (tetraphis_pellucida)
Imported from atlas release summary for Tetraphis pellucida.
941
Candidate Protein Records
693
Pathway-Level Records
1777
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1777
Family-Level Calls
C4H
6.42%
POD
6.08%
C3'H/CYP98A
5.97%
NMT
5.23%
BAHD
4.95%
CYP76
4.28%
4CL
4.05%
IFS
3.6%
Other Families
59.43%
More Families (95)
UGT
52
2.93%
PAL
51
2.87%
UFGT
50
2.81%
7DLGT
49
2.76%
T3O
46
2.59%
F3H
46
2.59%
BR6OX2/CYP85A2
44
2.48%
STR
42
2.36%
IFR
38
2.14%
GS
32
1.8%
DWF4/CYP90B1
29
1.63%
CODM/T6ODM
28
1.58%
H6H
24
1.35%
F3'H/CYP75B
22
1.24%
T16H
21
1.18%
PYKS
21
1.18%
SMT1/SMT2/SMT3
19
1.07%
CYP71
18
1.01%
CAD
17
0.96%
SLS
16
0.9%
CPD/CYP90A1
16
0.9%
IO
15
0.84%
RAS
15
0.84%
F3'5'H/CYP75A
14
0.79%
TRI/TRII
13
0.73%
SGD
13
0.73%
HCT
13
0.73%
FNS
12
0.68%
COMT
12
0.68%
CAS
12
0.68%
7DLH
11
0.62%
CHS
11
0.62%
LAC
11
0.62%
CSE
11
0.62%
CNMT
9
0.51%
G8O/G8H
9
0.51%
ANR
9
0.51%
CCR
8
0.45%
DWF5
8
0.45%
ROT3/CYP90C1
8
0.45%
NCS
7
0.39%
COR
7
0.39%
DFR
7
0.39%
CYP90D1
6
0.34%
AACT
6
0.34%
PMT
5
0.28%
8HGO
5
0.28%
16OMT
5
0.28%
SMO1/SMO2
5
0.28%
ANS/LDOX
4
0.23%
CPR
4
0.23%
SQS/FDFT1
4
0.23%
BR6OX1/CYP85A1
4
0.23%
DET2
4
0.23%
GGPPS
4
0.23%
TPS
4
0.23%
MVK
4
0.23%
BBE
3
0.17%
TDC
3
0.17%
ADC
3
0.17%
ISY
3
0.17%
MPO
3
0.17%
CYP80B1
3
0.17%
CHI
3
0.17%
F5H/CYP84A
3
0.17%
TAT
3
0.17%
CYP51G1
3
0.17%
HYD1
3
0.17%
HMGR
3
0.17%
DXS
3
0.17%
6OMT_4OMT_SOMT
2
0.11%
LAMT
2
0.11%
CYP719
2
0.11%
CCoAOMT
2
0.11%
DWF1
2
0.11%
SQE
2
0.11%
PMK
2
0.11%
MVD
2
0.11%
HMGS
2
0.11%
IDI
2
0.11%
DXR
2
0.11%
FPPS
2
0.11%
TYDC_DDC
1
0.06%
ODC
1
0.06%
GES
1
0.06%
FLS
1
0.06%
HPPR
1
0.06%
FK
1
0.06%
DWF7
1
0.06%
CPI1
1
0.06%
HDS/IspG
1
0.06%
MCT/IspD
1
0.06%
CMK/IspE
1
0.06%
HDR/IspH
1
0.06%
MDS/IspF
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 178 | 10 | POD (102) | View species results |
| Terpenoid pathway | 165 | 19 | BAHD (61) | View species results |
| Alkaloid pathway | 140 | 19 | 7DLGT (33) | View species results |
| Flavonoid pathway | 102 | 8 | UFGT (47) | View species results |
| Rosmarinic acid pathway | 68 | 7 | C4H (27) | View species results |
| Steroid pathway | 40 | 14 | CAS (10) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 650 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 116 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Tpelscaffold_40072880 | Alkaloid | T3O | medium | pass |
| Tpelscaffold_40073230 | Alkaloid | T3O | medium | borderline |
| Tpelscaffold_40080070 | Alkaloid | T3O | medium | borderline |
| Tpelscaffold_40080300 | Alkaloid | T3O | low | borderline |
| Tpelscaffold_40093820 | Alkaloid | T3O | medium | pass |
| Tpelscaffold_40093830 | Alkaloid | T3O | medium | pass |
| Tpelscaffold_40096450 | Alkaloid | T3O | medium | borderline |
| Tpelscaffold_40097870 | Alkaloid | T3O | high | pass |
| Tpelscaffold_50104850 | Alkaloid | T3O | medium | borderline |
| Tpelscaffold_50105820 | Alkaloid | T3O | medium | borderline |
| Tpelscaffold_50110680 | Alkaloid | T3O | medium | borderline |
| Tpelscaffold_50115410 | Alkaloid | T3O | low | borderline |
| Tpelscaffold_50127050 | Alkaloid | T3O | medium | pass |
| Tpelscaffold_60134380 | Alkaloid | T3O | medium | borderline |
| Tpelscaffold_60145010 | Alkaloid | T3O | low | borderline |
| Tpelscaffold_60147000 | Alkaloid | T3O | medium | pass |
| Tpelscaffold_70151560 | Alkaloid | T3O | medium | borderline |
| Tpelscaffold_70165700 | Alkaloid | T3O | medium | borderline |
| Tpelscaffold_70168060 | Alkaloid | T3O | low | borderline |
| Tpelscaffold_70172370 | Alkaloid | T3O | medium | borderline |
| Tpelscaffold_80179340 | Alkaloid | T3O | medium | borderline |
| Tpelscaffold_80179380 | Alkaloid | T3O | medium | borderline |
| Tpelscaffold_80179390 | Alkaloid | T3O | medium | borderline |
| Tpelscaffold_80182790 | Alkaloid | T3O | low | borderline |
| Tpelscaffold_80184220 | Alkaloid | T3O | medium | borderline |
| Tpelscaffold_80200300 | Alkaloid | T3O | medium | pass |
| Tpelscaffold_90208880 | Alkaloid | T3O | medium | pass |
| Tpelscaffold_90213450 | Alkaloid | T3O | medium | pass |
| Tpelscaffold_90213460 | Alkaloid | T3O | medium | pass |
| Tpelscaffold_90220600 | Alkaloid | T3O | medium | borderline |
| Tpelscaffold_90226010 | Alkaloid | T3O | medium | pass |
| Tpelscaffold_20030520 | Alkaloid | TDC | low | borderline |
| Tpelscaffold_20030540 | Alkaloid | TDC | low | borderline |
| Tpelscaffold_70170660 | Alkaloid | TDC | low | borderline |
| Tpelscaffold_10002890 | Alkaloid | TRI/TRII | low | borderline |
| Tpelscaffold_20033790 | Alkaloid | TRI/TRII | medium | pass |
| Tpelscaffold_20035900 | Alkaloid | TRI/TRII | low | borderline |
| Tpelscaffold_30063880 | Alkaloid | TRI/TRII | low | borderline |
| Tpelscaffold_40087530 | Alkaloid | TRI/TRII | medium | pass |
| Tpelscaffold_40099500 | Alkaloid | TRI/TRII | medium | pass |
| Tpelscaffold_50108020 | Alkaloid | TRI/TRII | medium | pass |
| Tpelscaffold_50115280 | Alkaloid | TRI/TRII | low | borderline |
| Tpelscaffold_60148750 | Alkaloid | TRI/TRII | low | borderline |
| Tpelscaffold_80178900 | Alkaloid | TRI/TRII | low | borderline |
| Tpelscaffold_80203200 | Alkaloid | TRI/TRII | medium | pass |
| Tpelscaffold_80203910 | Alkaloid | TRI/TRII | low | borderline |
| Tpelscaffold_90218430 | Alkaloid | TRI/TRII | low | borderline |
| Tpelscaffold_30052410 | Alkaloid | TYDC_DDC | medium | borderline |
| Tpelscaffold_10005490 | Flavonoid | 4CL | medium | pass |
| Tpelscaffold_10019380 | Flavonoid | 4CL | medium | pass |