Tetraphis pellucida (tetraphis_pellucida)
Imported from atlas release summary for Tetraphis pellucida.
693
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
693
Candidate Genes
C4H
6.42%
POD
6.08%
C3'H/CYP98A
5.97%
NMT
5.23%
BAHD
4.95%
CYP76
4.28%
4CL
4.05%
IFS
3.6%
Other Families
59.43%
More Families (95)
UGT
52
2.93%
PAL
51
2.87%
UFGT
50
2.81%
7DLGT
49
2.76%
T3O
46
2.59%
F3H
46
2.59%
BR6OX2/CYP85A2
44
2.48%
STR
42
2.36%
IFR
38
2.14%
GS
32
1.8%
DWF4/CYP90B1
29
1.63%
CODM/T6ODM
28
1.58%
H6H
24
1.35%
F3'H/CYP75B
22
1.24%
T16H
21
1.18%
PYKS
21
1.18%
SMT1/SMT2/SMT3
19
1.07%
CYP71
18
1.01%
CAD
17
0.96%
SLS
16
0.9%
CPD/CYP90A1
16
0.9%
IO
15
0.84%
RAS
15
0.84%
F3'5'H/CYP75A
14
0.79%
TRI/TRII
13
0.73%
SGD
13
0.73%
HCT
13
0.73%
FNS
12
0.68%
COMT
12
0.68%
CAS
12
0.68%
7DLH
11
0.62%
CHS
11
0.62%
LAC
11
0.62%
CSE
11
0.62%
CNMT
9
0.51%
G8O/G8H
9
0.51%
ANR
9
0.51%
CCR
8
0.45%
DWF5
8
0.45%
ROT3/CYP90C1
8
0.45%
NCS
7
0.39%
COR
7
0.39%
DFR
7
0.39%
CYP90D1
6
0.34%
AACT
6
0.34%
PMT
5
0.28%
8HGO
5
0.28%
16OMT
5
0.28%
SMO1/SMO2
5
0.28%
ANS/LDOX
4
0.23%
CPR
4
0.23%
SQS/FDFT1
4
0.23%
BR6OX1/CYP85A1
4
0.23%
DET2
4
0.23%
GGPPS
4
0.23%
TPS
4
0.23%
MVK
4
0.23%
BBE
3
0.17%
TDC
3
0.17%
ADC
3
0.17%
ISY
3
0.17%
MPO
3
0.17%
CYP80B1
3
0.17%
CHI
3
0.17%
F5H/CYP84A
3
0.17%
TAT
3
0.17%
CYP51G1
3
0.17%
HYD1
3
0.17%
HMGR
3
0.17%
DXS
3
0.17%
6OMT_4OMT_SOMT
2
0.11%
LAMT
2
0.11%
CYP719
2
0.11%
CCoAOMT
2
0.11%
DWF1
2
0.11%
SQE
2
0.11%
PMK
2
0.11%
MVD
2
0.11%
HMGS
2
0.11%
IDI
2
0.11%
DXR
2
0.11%
FPPS
2
0.11%
TYDC_DDC
1
0.06%
ODC
1
0.06%
GES
1
0.06%
FLS
1
0.06%
HPPR
1
0.06%
FK
1
0.06%
DWF7
1
0.06%
CPI1
1
0.06%
HDS/IspG
1
0.06%
MCT/IspD
1
0.06%
CMK/IspE
1
0.06%
HDR/IspH
1
0.06%
MDS/IspF
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 178 | 10 | POD (102) | View species results |
| Terpenoid pathway | 165 | 19 | BAHD (61) | View species results |
| Alkaloid pathway | 140 | 19 | 7DLGT (33) | View species results |
| Flavonoid pathway | 102 | 8 | UFGT (47) | View species results |
| Rosmarinic acid pathway | 68 | 7 | C4H (27) | View species results |
| Steroid pathway | 40 | 14 | CAS (10) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 650 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 116 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Tpelscaffold_50108920 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Tpelscaffold_50112950 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Tpelscaffold_50116160 | Terpenoid | BAHD | low | borderline | BAHD__00093__sp_Q9SV07_ASAT1_ARATH |
| Tpelscaffold_50118460 | Terpenoid | BAHD | medium | pass | BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE |
| Tpelscaffold_50125620 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Tpelscaffold_50127060 | Terpenoid | BAHD | medium | pass | BAHD__00004__sp_A0A0M4FCN7_RAM2_PETHY |
| Tpelscaffold_50127210 | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| Tpelscaffold_50130110 | Terpenoid | BAHD | medium | pass | BAHD__00057__sp_Q8L7R3_LPCT1_ARATH |
| Tpelscaffold_60134930 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Tpelscaffold_60135390 | Terpenoid | BAHD | medium | pass | BAHD__00068__sp_Q9C533_ZDHC1_ARATH |
| Tpelscaffold_60139820 | Terpenoid | BAHD | low | borderline | BAHD__00067__sp_Q9ASU1_DGAT2_ARATH |
| Tpelscaffold_60145560 | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| Tpelscaffold_60148120 | Terpenoid | BAHD | low | borderline | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| Tpelscaffold_70152670 | Terpenoid | BAHD | medium | pass | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| Tpelscaffold_70154000 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| Tpelscaffold_70154900 | Terpenoid | BAHD | medium | pass | BAHD__00087__sp_Q9M3B1_WSD6_ARATH |
| Tpelscaffold_70155230 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| Tpelscaffold_70156480 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Tpelscaffold_70165650 | Terpenoid | BAHD | medium | pass | BAHD__00014__sp_B9RK42_GPC1_RICCO |
| Tpelscaffold_70166430 | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| Tpelscaffold_70169300 | Terpenoid | BAHD | low | borderline | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| Tpelscaffold_70169770 | Terpenoid | BAHD | low | borderline | BAHD__00042__sp_Q500Z2_ZDH20_ARATH |
| Tpelscaffold_80178170 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| Tpelscaffold_80183470 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Tpelscaffold_80187170 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Tpelscaffold_80189640 | Terpenoid | BAHD | low | borderline | BAHD__00068__sp_Q9C533_ZDHC1_ARATH |
| Tpelscaffold_80190240 | Terpenoid | BAHD | medium | pass | BAHD__00079__sp_Q9LIE4_ZDHC8_ARATH |
| Tpelscaffold_80192840 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| Tpelscaffold_80196270 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Tpelscaffold_80198870 | Terpenoid | BAHD | medium | pass | BAHD__00022__sp_K7PEY4_RAM2_MEDTR |
| Tpelscaffold_80198890 | Terpenoid | BAHD | medium | pass | BAHD__00022__sp_K7PEY4_RAM2_MEDTR |
| Tpelscaffold_80202100 | Terpenoid | BAHD | low | borderline | BAHD__00023__sp_O22975_LPAAT_ARATH |
| Tpelscaffold_90208430 | Terpenoid | BAHD | medium | pass | BAHD__00068__sp_Q9C533_ZDHC1_ARATH |
| Tpelscaffold_90210090 | Terpenoid | BAHD | medium | pass | BAHD__00060__sp_Q8VYP5_ZDH14_ARATH |
| Tpelscaffold_90210890 | Terpenoid | BAHD | medium | pass | BAHD__00067__sp_Q9ASU1_DGAT2_ARATH |
| Tpelscaffold_90213110 | Terpenoid | BAHD | medium | pass | BAHD__00093__sp_Q9SV07_ASAT1_ARATH |
| Tpelscaffold_90213180 | Terpenoid | BAHD | medium | pass | BAHD__00023__sp_O22975_LPAAT_ARATH |
| Tpelscaffold_90214530 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| Tpelscaffold_90215710 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Tpelscaffold_90216350 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Tpelscaffold_90217610 | Terpenoid | BAHD | medium | pass | BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH |
| Tpelscaffold_90218670 | Terpenoid | BAHD | medium | pass | BAHD__00079__sp_Q9LIE4_ZDHC8_ARATH |
| Tpelscaffold_90226900 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| Tpelscaffold_90226920 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| Tpelscaffold_20041840 | Terpenoid | CMK/IspE | high | pass | CMK_IspE__00001__sp_O81014_ISPE_ARATH |
| Tpelscaffold_10003520 | Terpenoid | CYP71 | low | borderline | CYP71__00001__sp_Q8W4D0_CPY71_ARATH |
| Tpelscaffold_20029910 | Terpenoid | CYP71 | low | borderline | CYP71__00001__sp_Q8W4D0_CPY71_ARATH |
| Tpelscaffold_20044950 | Terpenoid | CYP71 | low | borderline | CYP71__00002__sp_W8JDE2_C71Y1_CATRO |
| Tpelscaffold_30055920 | Terpenoid | CYP71 | medium | pass | CYP71__00001__sp_Q8W4D0_CPY71_ARATH |
| Tpelscaffold_30056770 | Terpenoid | CYP71 | low | borderline | CYP71__00002__sp_W8JDE2_C71Y1_CATRO |