PlantSME Plant secondary metabolism enzyme database

Tetraphis pellucida (tetraphis_pellucida)

Imported from atlas release summary for Tetraphis pellucida.

693
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 178 10 POD (102) View species results
Terpenoid pathway 165 19 BAHD (61) View species results
Alkaloid pathway 140 19 7DLGT (33) View species results
Flavonoid pathway 102 8 UFGT (47) View species results
Rosmarinic acid pathway 68 7 C4H (27) View species results
Steroid pathway 40 14 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 650 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Tpelscaffold_70161690 Rosmarinic Acid C4H medium pass
Tpelscaffold_70164230 Rosmarinic Acid C4H medium pass
Tpelscaffold_70165700 Rosmarinic Acid C4H medium pass
Tpelscaffold_70167010 Rosmarinic Acid C4H low borderline
Tpelscaffold_70172370 Rosmarinic Acid C4H medium pass
Tpelscaffold_80179340 Rosmarinic Acid C4H low borderline
Tpelscaffold_80179380 Rosmarinic Acid C4H medium pass
Tpelscaffold_80179390 Rosmarinic Acid C4H medium pass
Tpelscaffold_80184220 Rosmarinic Acid C4H medium pass
Tpelscaffold_80200220 Rosmarinic Acid C4H medium pass
Tpelscaffold_80200300 Rosmarinic Acid C4H low borderline
Tpelscaffold_80202740 Rosmarinic Acid C4H low borderline
Tpelscaffold_90208880 Rosmarinic Acid C4H low borderline
Tpelscaffold_90213450 Rosmarinic Acid C4H low borderline
Tpelscaffold_90213460 Rosmarinic Acid C4H low borderline
Tpelscaffold_90215020 Rosmarinic Acid C4H low borderline
Tpelscaffold_90219860 Rosmarinic Acid C4H low borderline
Tpelscaffold_90220270 Rosmarinic Acid C4H medium pass
Tpelscaffold_90220600 Rosmarinic Acid C4H low borderline
Tpelscaffold_90222760 Rosmarinic Acid C4H low borderline
Tpelscaffold_90226010 Rosmarinic Acid C4H low borderline
Tpelscaffold_90226340 Rosmarinic Acid C4H low borderline
Tpelscaffold_90226740 Rosmarinic Acid C4H medium pass
Tpelscaffold_40082050 Rosmarinic Acid CPR medium pass
Tpelscaffold_40099380 Rosmarinic Acid CPR low borderline
Tpelscaffold_50111740 Rosmarinic Acid CPR medium pass
Tpelscaffold_80192570 Rosmarinic Acid CPR medium pass
Tpelscaffold_30057150 Rosmarinic Acid HPPR medium pass
Tpelscaffold_20026170 Rosmarinic Acid PAL high pass
Tpelscaffold_20026180 Rosmarinic Acid PAL high pass
Tpelscaffold_40084780 Rosmarinic Acid PAL low borderline
Tpelscaffold_60138790 Rosmarinic Acid PAL medium pass
Tpelscaffold_60138800 Rosmarinic Acid PAL medium pass
Tpelscaffold_60145890 Rosmarinic Acid PAL high pass
Tpelscaffold_60150070 Rosmarinic Acid PAL high pass
Tpelscaffold_70157660 Rosmarinic Acid PAL medium pass
Tpelscaffold_70157670 Rosmarinic Acid PAL high pass
Tpelscaffold_80198460 Rosmarinic Acid PAL high pass
Tpelscaffold_80199720 Rosmarinic Acid PAL high pass
Tpelscaffold_80199730 Rosmarinic Acid PAL high pass
Tpelscaffold_80199960 Rosmarinic Acid PAL high pass
Tpelscaffold_90211550 Rosmarinic Acid PAL high pass
Tpelscaffold_90213650 Rosmarinic Acid PAL medium pass
Tpelscaffold_90213660 Rosmarinic Acid PAL high pass
Tpelscaffold_90213670 Rosmarinic Acid PAL high pass
Tpelscaffold_10009470 Rosmarinic Acid RAS medium pass
Tpelscaffold_20023490 Rosmarinic Acid RAS medium pass
Tpelscaffold_40070680 Rosmarinic Acid RAS medium pass
Tpelscaffold_40072400 Rosmarinic Acid RAS medium pass
Tpelscaffold_40072780 Rosmarinic Acid RAS low borderline