PlantSME Plant secondary metabolism enzyme database

Tetraphis pellucida (tetraphis_pellucida)

Imported from atlas release summary for Tetraphis pellucida.

693
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 178 10 POD (102) View species results
Terpenoid pathway 165 19 BAHD (61) View species results
Alkaloid pathway 140 19 7DLGT (33) View species results
Flavonoid pathway 102 8 UFGT (47) View species results
Rosmarinic acid pathway 68 7 C4H (27) View species results
Steroid pathway 40 14 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 650 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Tpelscaffold_80189820 Phenylpropanoid CAD medium borderline
Tpelscaffold_90212850 Phenylpropanoid CAD medium borderline
Tpelscaffold_90212860 Phenylpropanoid CAD medium borderline
Tpelscaffold_90223530 Phenylpropanoid CAD medium pass
Tpelscaffold_90228370 Phenylpropanoid CAD medium pass
Tpelscaffold_10013770 Phenylpropanoid CCR low borderline
Tpelscaffold_20032500 Phenylpropanoid CCR medium borderline
Tpelscaffold_20044270 Phenylpropanoid CCR medium borderline
Tpelscaffold_50109820 Phenylpropanoid CCR medium borderline
Tpelscaffold_50118930 Phenylpropanoid CCR low borderline
Tpelscaffold_60149600 Phenylpropanoid CCR low borderline
Tpelscaffold_70169260 Phenylpropanoid CCR medium borderline
Tpelscaffold_90223100 Phenylpropanoid CCR low borderline
Tpelscaffold_40101340 Phenylpropanoid CCoAOMT medium pass
Tpelscaffold_60140030 Phenylpropanoid CCoAOMT medium pass
Tpelscaffold_10010890 Phenylpropanoid COMT medium pass
Tpelscaffold_110022010 Phenylpropanoid COMT low borderline
Tpelscaffold_20028110 Phenylpropanoid COMT low borderline
Tpelscaffold_30064640 Phenylpropanoid COMT low borderline
Tpelscaffold_50107630 Phenylpropanoid COMT medium pass
Tpelscaffold_50110840 Phenylpropanoid COMT medium pass
Tpelscaffold_50112990 Phenylpropanoid COMT medium pass
Tpelscaffold_50117110 Phenylpropanoid COMT medium pass
Tpelscaffold_60133950 Phenylpropanoid COMT medium pass
Tpelscaffold_90204990 Phenylpropanoid COMT medium pass
Tpelscaffold_90221470 Phenylpropanoid COMT medium pass
Tpelscaffold_90221490 Phenylpropanoid COMT medium pass
Tpelscaffold_20027620 Phenylpropanoid CSE low borderline
Tpelscaffold_30050060 Phenylpropanoid CSE medium pass
Tpelscaffold_30054740 Phenylpropanoid CSE medium pass
Tpelscaffold_40099730 Phenylpropanoid CSE medium pass
Tpelscaffold_50112910 Phenylpropanoid CSE medium pass
Tpelscaffold_50113270 Phenylpropanoid CSE medium pass
Tpelscaffold_60147910 Phenylpropanoid CSE medium pass
Tpelscaffold_70151140 Phenylpropanoid CSE medium pass
Tpelscaffold_70158520 Phenylpropanoid CSE low borderline
Tpelscaffold_70174890 Phenylpropanoid CSE medium pass
Tpelscaffold_90204780 Phenylpropanoid CSE medium pass
Tpelscaffold_20027370 Phenylpropanoid F5H/CYP84A medium borderline
Tpelscaffold_30064910 Phenylpropanoid F5H/CYP84A low borderline
Tpelscaffold_50123030 Phenylpropanoid F5H/CYP84A medium borderline
Tpelscaffold_10009470 Phenylpropanoid HCT medium pass
Tpelscaffold_20023490 Phenylpropanoid HCT medium pass
Tpelscaffold_40070680 Phenylpropanoid HCT medium pass
Tpelscaffold_40072400 Phenylpropanoid HCT medium pass
Tpelscaffold_40072780 Phenylpropanoid HCT medium pass
Tpelscaffold_40074220 Phenylpropanoid HCT medium pass
Tpelscaffold_40074250 Phenylpropanoid HCT medium pass
Tpelscaffold_40087090 Phenylpropanoid HCT medium pass
Tpelscaffold_40098440 Phenylpropanoid HCT medium pass