PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1313
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
THsancontig_1130017990 Steroid BR6OX1/CYP85A1 low borderline
THsancontig_180110740 Steroid BR6OX1/CYP85A1 low borderline
THsancontig_2830244990 Steroid BR6OX1/CYP85A1 low borderline
THsancontig_3390340180 Steroid BR6OX1/CYP85A1 medium borderline
THsancontig_3420348880 Steroid BR6OX1/CYP85A1 low borderline
THsancontig_3480366610 Steroid BR6OX1/CYP85A1 medium borderline
THsancontig_860517230 Steroid BR6OX1/CYP85A1 low borderline
THsancontig_1140020430 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1140020440 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1140020880 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1170032000 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1280049350 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1480074660 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_150076570 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1680093880 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1680093920 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1680093930 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1680094470 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1680096270 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1820117510 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1850119040 Steroid BR6OX2/CYP85A2 medium borderline
THsancontig_1920124070 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1920124100 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1920124110 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_1920126610 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2100154600 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2100154720 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2100154790 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2110156660 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2110156870 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2140166900 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2150170430 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2150170460 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2150170490 Steroid BR6OX2/CYP85A2 medium pass
THsancontig_2150170510 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2150170540 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2210176920 Steroid BR6OX2/CYP85A2 medium borderline
THsancontig_2460191440 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2460191620 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2480194750 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2590207660 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2750226740 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2750227620 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2830244970 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2950268460 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_2950268470 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3010279260 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3010279310 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3030282740 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3170302060 Steroid BR6OX2/CYP85A2 low borderline