PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1313
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
THsancontig_3170302180 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3210308650 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3230313650 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3290328210 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3300329850 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3300329960 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3310333540 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3400342600 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3570373240 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3570373440 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_360377120 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3690382680 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3730387730 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3730391200 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3730391370 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3830406140 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3830406370 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3930415220 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_3940415590 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_4070441510 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_420446370 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_480461350 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_540470080 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_570478400 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_600491910 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_610497850 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_760507240 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_760508000 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_860519070 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_860519610 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_90520690 Steroid BR6OX2/CYP85A2 low borderline
THsancontig_950523300 Steroid BR6OX2/CYP85A2 medium borderline
THsancontig_1060008870 Steroid CAS medium pass
THsancontig_1270048360 Steroid CAS medium pass
THsancontig_140064800 Steroid CAS medium pass
THsancontig_1490075310 Steroid CAS medium pass
THsancontig_1490075320 Steroid CAS medium pass
THsancontig_1690098120 Steroid CAS medium pass
THsancontig_1690098130 Steroid CAS medium pass
THsancontig_1890122880 Steroid CAS medium pass
THsancontig_2110157600 Steroid CAS medium pass
THsancontig_2480193720 Steroid CAS medium pass
THsancontig_2530199650 Steroid CAS medium pass
THsancontig_2620212470 Steroid CAS medium pass
THsancontig_270222610 Steroid CAS medium pass
THsancontig_2820240900 Steroid CAS medium pass
THsancontig_2880261530 Steroid CAS low borderline
THsancontig_2990273770 Steroid CAS medium pass
THsancontig_3220309940 Steroid CAS medium pass
THsancontig_3400342670 Steroid CAS medium pass