PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1313
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
THsancontig_360378650 Steroid CAS medium pass
THsancontig_3610380370 Steroid CAS medium pass
THsancontig_3830407130 Steroid CAS medium pass
THsancontig_3850409710 Steroid CAS medium pass
THsancontig_4030431900 Steroid CAS medium pass
THsancontig_4060438870 Steroid CAS medium pass
THsancontig_4060438900 Steroid CAS medium pass
THsancontig_4060438920 Steroid CAS medium pass
THsancontig_4060438930 Steroid CAS medium pass
THsancontig_4070441840 Steroid CAS low borderline
THsancontig_480461420 Steroid CAS medium pass
THsancontig_590486000 Steroid CAS low borderline
THsancontig_760507160 Steroid CAS medium pass
THsancontig_760507260 Steroid CAS medium pass
THsancontig_800511080 Steroid CAS medium pass
THsancontig_800511140 Steroid CAS medium pass
THsancontig_860519060 Steroid CAS medium pass
THsancontig_1170032330 Steroid CPD/CYP90A1 medium borderline
THsancontig_1170032580 Steroid CPD/CYP90A1 medium borderline
THsancontig_1360059410 Steroid CPD/CYP90A1 low borderline
THsancontig_1680096260 Steroid CPD/CYP90A1 medium borderline
THsancontig_1680096280 Steroid CPD/CYP90A1 low borderline
THsancontig_1810114160 Steroid CPD/CYP90A1 low borderline
THsancontig_1820117480 Steroid CPD/CYP90A1 low borderline
THsancontig_1890122450 Steroid CPD/CYP90A1 medium borderline
THsancontig_2420188920 Steroid CPD/CYP90A1 medium borderline
THsancontig_2560205110 Steroid CPD/CYP90A1 low borderline
THsancontig_2760229130 Steroid CPD/CYP90A1 medium borderline
THsancontig_2820240410 Steroid CPD/CYP90A1 medium borderline
THsancontig_2860250910 Steroid CPD/CYP90A1 low borderline
THsancontig_2880259310 Steroid CPD/CYP90A1 medium borderline
THsancontig_2990273300 Steroid CPD/CYP90A1 medium borderline
THsancontig_300275210 Steroid CPD/CYP90A1 low borderline
THsancontig_300275220 Steroid CPD/CYP90A1 low borderline
THsancontig_3140298180 Steroid CPD/CYP90A1 low borderline
THsancontig_3220310360 Steroid CPD/CYP90A1 medium borderline
THsancontig_3260319530 Steroid CPD/CYP90A1 medium borderline
THsancontig_3260319790 Steroid CPD/CYP90A1 medium borderline
THsancontig_3450358220 Steroid CPD/CYP90A1 low borderline
THsancontig_3530369130 Steroid CPD/CYP90A1 medium borderline
THsancontig_610500290 Steroid CPD/CYP90A1 low borderline
THsancontig_1050006790 Steroid CPI1 high pass
THsancontig_3020282310 Steroid CPI1 high pass
THsancontig_1360059970 Steroid CYP51G1 medium borderline
THsancontig_1640086800 Steroid CYP90D1 low borderline
THsancontig_1890123280 Steroid CYP90D1 medium borderline
THsancontig_2820241300 Steroid CYP90D1 medium borderline
THsancontig_3070287390 Steroid CYP90D1 low borderline
THsancontig_3460365510 Steroid CYP90D1 low borderline
THsancontig_3500368090 Steroid CYP90D1 low borderline