PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1313
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
THsancontig_3600379560 Steroid CYP90D1 low borderline
THsancontig_3610380300 Steroid CYP90D1 low borderline
THsancontig_3640381150 Steroid CYP90D1 low borderline
THsancontig_3990420530 Steroid CYP90D1 low borderline
THsancontig_400424480 Steroid CYP90D1 low borderline
THsancontig_4060437430 Steroid CYP90D1 low borderline
THsancontig_4060438780 Steroid CYP90D1 low borderline
THsancontig_440451920 Steroid CYP90D1 low borderline
THsancontig_90520710 Steroid CYP90D1 low borderline
THsancontig_2640215390 Steroid DET2 medium pass
THsancontig_360376200 Steroid DET2 low borderline
THsancontig_3790395270 Steroid DET2 low borderline
THsancontig_3790396970 Steroid DET2 low borderline
THsancontig_880520460 Steroid DET2 low borderline
THsancontig_1520079060 Steroid DWF1 low borderline
THsancontig_1520079070 Steroid DWF1 low borderline
THsancontig_420445530 Steroid DWF1 medium pass
THsancontig_560475280 Steroid DWF1 medium pass
THsancontig_1000001160 Steroid DWF4/CYP90B1 low borderline
THsancontig_1000001190 Steroid DWF4/CYP90B1 low borderline
THsancontig_1000001200 Steroid DWF4/CYP90B1 low borderline
THsancontig_1080012240 Steroid DWF4/CYP90B1 low borderline
THsancontig_1140019760 Steroid DWF4/CYP90B1 low borderline
THsancontig_1140019790 Steroid DWF4/CYP90B1 low borderline
THsancontig_1140019900 Steroid DWF4/CYP90B1 low borderline
THsancontig_1140019910 Steroid DWF4/CYP90B1 low borderline
THsancontig_1140020070 Steroid DWF4/CYP90B1 low borderline
THsancontig_1170032440 Steroid DWF4/CYP90B1 medium borderline
THsancontig_1220037950 Steroid DWF4/CYP90B1 medium borderline
THsancontig_1270047330 Steroid DWF4/CYP90B1 low borderline
THsancontig_130051370 Steroid DWF4/CYP90B1 low borderline
THsancontig_130051400 Steroid DWF4/CYP90B1 low borderline
THsancontig_130051410 Steroid DWF4/CYP90B1 low borderline
THsancontig_1370063650 Steroid DWF4/CYP90B1 low borderline
THsancontig_1370063670 Steroid DWF4/CYP90B1 low borderline
THsancontig_140064980 Steroid DWF4/CYP90B1 low borderline
THsancontig_1470073960 Steroid DWF4/CYP90B1 medium borderline
THsancontig_150076220 Steroid DWF4/CYP90B1 low borderline
THsancontig_1590082460 Steroid DWF4/CYP90B1 low borderline
THsancontig_1680093080 Steroid DWF4/CYP90B1 low borderline
THsancontig_1680093100 Steroid DWF4/CYP90B1 low borderline
THsancontig_1680093120 Steroid DWF4/CYP90B1 low borderline
THsancontig_1680093260 Steroid DWF4/CYP90B1 low borderline
THsancontig_1680093290 Steroid DWF4/CYP90B1 low borderline
THsancontig_1680093440 Steroid DWF4/CYP90B1 low borderline
THsancontig_170100640 Steroid DWF4/CYP90B1 low borderline
THsancontig_1850119890 Steroid DWF4/CYP90B1 low borderline
THsancontig_2050148250 Steroid DWF4/CYP90B1 medium borderline
THsancontig_2050148260 Steroid DWF4/CYP90B1 medium borderline
THsancontig_2050148320 Steroid DWF4/CYP90B1 low borderline