PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1313
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
THsancontig_910521700 Alkaloid COR medium pass
THsancontig_1670091600 Alkaloid CYP719 low borderline
THsancontig_2080149920 Alkaloid CYP719 medium pass
THsancontig_3150299590 Alkaloid CYP719 low borderline
THsancontig_3280325040 Alkaloid CYP719 low borderline
THsancontig_3400342600 Alkaloid CYP719 medium borderline
THsancontig_3640381150 Alkaloid CYP719 low borderline
THsancontig_3730391200 Alkaloid CYP719 medium borderline
THsancontig_480461350 Alkaloid CYP719 medium borderline
THsancontig_520468320 Alkaloid CYP719 low borderline
THsancontig_1680093050 Alkaloid CYP80B1 medium pass
THsancontig_1820117480 Alkaloid CYP80B1 medium borderline
THsancontig_1920124070 Alkaloid CYP80B1 medium borderline
THsancontig_2040141190 Alkaloid CYP80B1 medium borderline
THsancontig_2040142890 Alkaloid CYP80B1 medium borderline
THsancontig_2150170500 Alkaloid CYP80B1 medium borderline
THsancontig_2830245000 Alkaloid CYP80B1 medium borderline
THsancontig_2830245010 Alkaloid CYP80B1 medium borderline
THsancontig_2830245110 Alkaloid CYP80B1 low borderline
THsancontig_3140298180 Alkaloid CYP80B1 medium borderline
THsancontig_3290328210 Alkaloid CYP80B1 medium borderline
THsancontig_3390340300 Alkaloid CYP80B1 medium borderline
THsancontig_3430350280 Alkaloid CYP80B1 medium borderline
THsancontig_360377120 Alkaloid CYP80B1 medium borderline
THsancontig_3910414650 Alkaloid CYP80B1 low borderline
THsancontig_980526130 Alkaloid CYP80B1 medium borderline
THsancontig_1140020450 Alkaloid CYP80F1 medium borderline
THsancontig_1320056190 Alkaloid CYP80F1 medium borderline
THsancontig_1680093940 Alkaloid CYP80F1 medium borderline
THsancontig_1800112790 Alkaloid CYP80F1 medium borderline
THsancontig_2560205110 Alkaloid CYP80F1 medium borderline
THsancontig_3070288950 Alkaloid CYP80F1 medium borderline
THsancontig_3890413180 Alkaloid CYP80F1 medium borderline
THsancontig_580480040 Alkaloid CYP80F1 medium borderline
THsancontig_1140020410 Alkaloid G8O/G8H low borderline
THsancontig_1140020440 Alkaloid G8O/G8H medium borderline
THsancontig_1150026390 Alkaloid G8O/G8H medium borderline
THsancontig_1220037950 Alkaloid G8O/G8H medium borderline
THsancontig_1240045850 Alkaloid G8O/G8H low borderline
THsancontig_130051390 Alkaloid G8O/G8H low borderline
THsancontig_1450072000 Alkaloid G8O/G8H medium pass
THsancontig_1680093060 Alkaloid G8O/G8H low borderline
THsancontig_1680093880 Alkaloid G8O/G8H medium borderline
THsancontig_1680096280 Alkaloid G8O/G8H medium borderline
THsancontig_1790108260 Alkaloid G8O/G8H medium borderline
THsancontig_1920126590 Alkaloid G8O/G8H medium pass
THsancontig_2100154720 Alkaloid G8O/G8H medium borderline
THsancontig_2150170430 Alkaloid G8O/G8H medium pass
THsancontig_2460191440 Alkaloid G8O/G8H medium borderline
THsancontig_2830244850 Alkaloid G8O/G8H low borderline