PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1313
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
THsancontig_2830244990 Alkaloid G8O/G8H medium borderline
THsancontig_2830245040 Alkaloid G8O/G8H medium borderline
THsancontig_2880257700 Alkaloid G8O/G8H low borderline
THsancontig_2950267760 Alkaloid G8O/G8H medium borderline
THsancontig_3030282740 Alkaloid G8O/G8H medium borderline
THsancontig_3190306770 Alkaloid G8O/G8H medium borderline
THsancontig_3210308650 Alkaloid G8O/G8H medium borderline
THsancontig_3220310400 Alkaloid G8O/G8H low borderline
THsancontig_3260319660 Alkaloid G8O/G8H medium borderline
THsancontig_3300329810 Alkaloid G8O/G8H low borderline
THsancontig_3300329840 Alkaloid G8O/G8H low borderline
THsancontig_3300329850 Alkaloid G8O/G8H medium borderline
THsancontig_3410345300 Alkaloid G8O/G8H medium borderline
THsancontig_3570373440 Alkaloid G8O/G8H low borderline
THsancontig_3610380300 Alkaloid G8O/G8H medium borderline
THsancontig_3670381710 Alkaloid G8O/G8H medium borderline
THsancontig_3730387730 Alkaloid G8O/G8H medium borderline
THsancontig_4030431090 Alkaloid G8O/G8H medium borderline
THsancontig_4060438780 Alkaloid G8O/G8H medium borderline
THsancontig_600490330 Alkaloid G8O/G8H medium borderline
THsancontig_1270048360 Alkaloid GES low borderline
THsancontig_1690098120 Alkaloid GES low borderline
THsancontig_4030431900 Alkaloid GES medium pass
THsancontig_760507160 Alkaloid GES low borderline
THsancontig_760507260 Alkaloid GES low borderline
THsancontig_800511140 Alkaloid GES low borderline
THsancontig_860519060 Alkaloid GES low borderline
THsancontig_1030004290 Alkaloid GS low borderline
THsancontig_1140020130 Alkaloid GS low borderline
THsancontig_1290050370 Alkaloid GS low borderline
THsancontig_1290051110 Alkaloid GS low borderline
THsancontig_1290051150 Alkaloid GS low borderline
THsancontig_1320055530 Alkaloid GS low borderline
THsancontig_1370060550 Alkaloid GS low borderline
THsancontig_1410069610 Alkaloid GS low borderline
THsancontig_1490075560 Alkaloid GS low borderline
THsancontig_1580081980 Alkaloid GS low borderline
THsancontig_1680093490 Alkaloid GS low borderline
THsancontig_1750103560 Alkaloid GS low borderline
THsancontig_1770105850 Alkaloid GS low borderline
THsancontig_1770105860 Alkaloid GS low borderline
THsancontig_1800112960 Alkaloid GS low borderline
THsancontig_1920123890 Alkaloid GS low borderline
THsancontig_2330184880 Alkaloid GS medium pass
THsancontig_2650217390 Alkaloid GS low borderline
THsancontig_270222620 Alkaloid GS low borderline
THsancontig_2710223430 Alkaloid GS low borderline
THsancontig_2730224570 Alkaloid GS medium pass
THsancontig_2790233760 Alkaloid GS low borderline
THsancontig_2800237630 Alkaloid GS high pass