PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1677
Candidate Protein Records
1313
Pathway-Level Records
3223
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
THsancontig_4030431090 Rosmarinic Acid C4H medium pass
THsancontig_4060437430 Rosmarinic Acid C4H medium pass
THsancontig_4060438780 Rosmarinic Acid C4H low borderline
THsancontig_4070440450 Rosmarinic Acid C4H low borderline
THsancontig_4070441510 Rosmarinic Acid C4H low borderline
THsancontig_440450630 Rosmarinic Acid C4H low borderline
THsancontig_440451920 Rosmarinic Acid C4H low borderline
THsancontig_480461350 Rosmarinic Acid C4H low borderline
THsancontig_540470210 Rosmarinic Acid C4H low borderline
THsancontig_540473240 Rosmarinic Acid C4H low borderline
THsancontig_570478400 Rosmarinic Acid C4H medium pass
THsancontig_580480720 Rosmarinic Acid C4H low borderline
THsancontig_580480750 Rosmarinic Acid C4H low borderline
THsancontig_600490330 Rosmarinic Acid C4H low borderline
THsancontig_600491910 Rosmarinic Acid C4H low borderline
THsancontig_610495770 Rosmarinic Acid C4H low borderline
THsancontig_610497850 Rosmarinic Acid C4H low borderline
THsancontig_610500290 Rosmarinic Acid C4H low borderline
THsancontig_760507240 Rosmarinic Acid C4H medium pass
THsancontig_760507280 Rosmarinic Acid C4H low borderline
THsancontig_760508000 Rosmarinic Acid C4H medium pass
THsancontig_760508310 Rosmarinic Acid C4H low borderline
THsancontig_860519070 Rosmarinic Acid C4H medium pass
THsancontig_860519610 Rosmarinic Acid C4H medium pass
THsancontig_860519810 Rosmarinic Acid C4H low borderline
THsancontig_90520690 Rosmarinic Acid C4H low borderline
THsancontig_90520700 Rosmarinic Acid C4H low borderline
THsancontig_90520710 Rosmarinic Acid C4H low borderline
THsancontig_980526130 Rosmarinic Acid C4H low borderline
THsancontig_1490075640 Rosmarinic Acid CPR medium pass
THsancontig_1630085490 Rosmarinic Acid CPR low borderline
THsancontig_3010279120 Rosmarinic Acid CPR medium pass
THsancontig_3300329420 Rosmarinic Acid CPR low borderline
THsancontig_3460365040 Rosmarinic Acid CPR medium pass
THsancontig_3600379030 Rosmarinic Acid CPR medium pass
THsancontig_3790395370 Rosmarinic Acid CPR low borderline
THsancontig_3790397110 Rosmarinic Acid CPR low borderline
THsancontig_390414140 Rosmarinic Acid CPR low borderline
THsancontig_440451490 Rosmarinic Acid CPR medium pass
THsancontig_740506460 Rosmarinic Acid CPR medium pass
THsancontig_3690382380 Rosmarinic Acid HPPR medium pass
THsancontig_3730391800 Rosmarinic Acid HPPR medium pass
THsancontig_1260046680 Rosmarinic Acid PAL medium pass
THsancontig_1260046690 Rosmarinic Acid PAL high pass
THsancontig_1350059010 Rosmarinic Acid PAL high pass
THsancontig_140064860 Rosmarinic Acid PAL high pass
THsancontig_140064890 Rosmarinic Acid PAL high pass
THsancontig_1530079620 Rosmarinic Acid PAL high pass
THsancontig_1530079640 Rosmarinic Acid PAL high pass
THsancontig_1530079670 Rosmarinic Acid PAL medium pass