PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1677
Candidate Protein Records
1313
Pathway-Level Records
3223
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
THsancontig_1530079680 Rosmarinic Acid PAL medium pass
THsancontig_1530079700 Rosmarinic Acid PAL high pass
THsancontig_1710102100 Rosmarinic Acid PAL high pass
THsancontig_1710102120 Rosmarinic Acid PAL high pass
THsancontig_2300183510 Rosmarinic Acid PAL high pass
THsancontig_2300183520 Rosmarinic Acid PAL high pass
THsancontig_2300183560 Rosmarinic Acid PAL high pass
THsancontig_2300183590 Rosmarinic Acid PAL high pass
THsancontig_2300183620 Rosmarinic Acid PAL high pass
THsancontig_2450189810 Rosmarinic Acid PAL medium pass
THsancontig_2510197860 Rosmarinic Acid PAL high pass
THsancontig_2510197950 Rosmarinic Acid PAL medium pass
THsancontig_2510197960 Rosmarinic Acid PAL medium pass
THsancontig_2560205140 Rosmarinic Acid PAL high pass
THsancontig_2620212350 Rosmarinic Acid PAL high pass
THsancontig_2620212370 Rosmarinic Acid PAL high pass
THsancontig_2670219700 Rosmarinic Acid PAL high pass
THsancontig_2670219730 Rosmarinic Acid PAL high pass
THsancontig_270222410 Rosmarinic Acid PAL high pass
THsancontig_2750227980 Rosmarinic Acid PAL medium pass
THsancontig_2750227990 Rosmarinic Acid PAL medium pass
THsancontig_2800237960 Rosmarinic Acid PAL high pass
THsancontig_280235320 Rosmarinic Acid PAL high pass
THsancontig_280235390 Rosmarinic Acid PAL high pass
THsancontig_2830246780 Rosmarinic Acid PAL high pass
THsancontig_2830246830 Rosmarinic Acid PAL high pass
THsancontig_2830246850 Rosmarinic Acid PAL high pass
THsancontig_2960269150 Rosmarinic Acid PAL high pass
THsancontig_2960269160 Rosmarinic Acid PAL medium pass
THsancontig_2960269190 Rosmarinic Acid PAL medium pass
THsancontig_2960269200 Rosmarinic Acid PAL high pass
THsancontig_2960269260 Rosmarinic Acid PAL high pass
THsancontig_2960269290 Rosmarinic Acid PAL high pass
THsancontig_2960269460 Rosmarinic Acid PAL high pass
THsancontig_2960269500 Rosmarinic Acid PAL medium pass
THsancontig_2960269510 Rosmarinic Acid PAL medium pass
THsancontig_3100294470 Rosmarinic Acid PAL high pass
THsancontig_3130295470 Rosmarinic Acid PAL high pass
THsancontig_3820403350 Rosmarinic Acid PAL high pass
THsancontig_3850409500 Rosmarinic Acid PAL high pass
THsancontig_4060436990 Rosmarinic Acid PAL high pass
THsancontig_580480080 Rosmarinic Acid PAL high pass
THsancontig_600493980 Rosmarinic Acid PAL high pass
THsancontig_600494020 Rosmarinic Acid PAL high pass
THsancontig_600494080 Rosmarinic Acid PAL high pass
THsancontig_1110015210 Rosmarinic Acid RAS medium pass
THsancontig_2120157770 Rosmarinic Acid RAS low borderline
THsancontig_2300183330 Rosmarinic Acid RAS low borderline
THsancontig_2760230320 Rosmarinic Acid RAS low borderline
THsancontig_2830247110 Rosmarinic Acid RAS low borderline