PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1677
Candidate Protein Records
1313
Pathway-Level Records
3223
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
THsancontig_2830244050 Alkaloid H6H medium borderline
THsancontig_2880257870 Alkaloid H6H low borderline
THsancontig_2880258530 Alkaloid H6H medium borderline
THsancontig_3090291270 Alkaloid H6H low borderline
THsancontig_3090291280 Alkaloid H6H low borderline
THsancontig_3090291290 Alkaloid H6H low borderline
THsancontig_310292060 Alkaloid H6H medium pass
THsancontig_3110294740 Alkaloid H6H low borderline
THsancontig_3270322810 Alkaloid H6H medium borderline
THsancontig_3350336690 Alkaloid H6H medium borderline
THsancontig_3400342680 Alkaloid H6H medium pass
THsancontig_360377960 Alkaloid H6H medium borderline
THsancontig_4000425670 Alkaloid H6H medium borderline
THsancontig_4070442860 Alkaloid H6H medium borderline
THsancontig_4070443230 Alkaloid H6H medium pass
THsancontig_480461430 Alkaloid H6H medium pass
THsancontig_540470500 Alkaloid H6H low borderline
THsancontig_580481200 Alkaloid H6H medium borderline
THsancontig_590487700 Alkaloid H6H low borderline
THsancontig_590487720 Alkaloid H6H low borderline
THsancontig_600490570 Alkaloid H6H low borderline
THsancontig_600490580 Alkaloid H6H low borderline
THsancontig_600491350 Alkaloid H6H medium borderline
THsancontig_1080012240 Alkaloid IO medium borderline
THsancontig_1140020430 Alkaloid IO medium borderline
THsancontig_1140020880 Alkaloid IO medium borderline
THsancontig_1170032440 Alkaloid IO medium borderline
THsancontig_1170032580 Alkaloid IO medium borderline
THsancontig_1260046670 Alkaloid IO medium borderline
THsancontig_1270047330 Alkaloid IO medium borderline
THsancontig_1270047940 Alkaloid IO low borderline
THsancontig_1270047970 Alkaloid IO low borderline
THsancontig_1270047990 Alkaloid IO low borderline
THsancontig_1280049350 Alkaloid IO medium borderline
THsancontig_1370063650 Alkaloid IO medium borderline
THsancontig_140064980 Alkaloid IO medium borderline
THsancontig_1470073960 Alkaloid IO medium borderline
THsancontig_1680093080 Alkaloid IO medium borderline
THsancontig_1680093920 Alkaloid IO medium borderline
THsancontig_1680093930 Alkaloid IO medium borderline
THsancontig_1680094470 Alkaloid IO medium borderline
THsancontig_1680096260 Alkaloid IO medium borderline
THsancontig_1680096270 Alkaloid IO medium borderline
THsancontig_170100640 Alkaloid IO medium borderline
THsancontig_1920124110 Alkaloid IO medium borderline
THsancontig_2110156870 Alkaloid IO medium borderline
THsancontig_2150170490 Alkaloid IO medium borderline
THsancontig_2460191620 Alkaloid IO medium borderline
THsancontig_2750226740 Alkaloid IO medium borderline
THsancontig_2750227620 Alkaloid IO medium borderline