PlantSME Plant secondary metabolism enzyme database

Thamnobryum sandei (thamnobryum_sandei)

Imported from atlas release summary for Thamnobryum sandei.

1677
Candidate Protein Records
1313
Pathway-Level Records
3223
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 347 12 POD (160) View species results
Terpenoid pathway 264 19 BAHD (92) View species results
Alkaloid pathway 251 23 PYKS (64) View species results
Flavonoid pathway 208 11 CHS (63) View species results
Rosmarinic acid pathway 166 7 C4H (59) View species results
Steroid pathway 77 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1231 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
THsancontig_2880259310 Alkaloid IO medium borderline
THsancontig_2990273300 Alkaloid IO medium borderline
THsancontig_3170300270 Alkaloid IO medium borderline
THsancontig_3220310360 Alkaloid IO medium borderline
THsancontig_3260319650 Alkaloid IO medium borderline
THsancontig_3260319790 Alkaloid IO medium borderline
THsancontig_3450358220 Alkaloid IO low borderline
THsancontig_3500368090 Alkaloid IO medium borderline
THsancontig_3690382680 Alkaloid IO medium borderline
THsancontig_3690384400 Alkaloid IO medium borderline
THsancontig_3730391370 Alkaloid IO medium borderline
THsancontig_3830406370 Alkaloid IO medium borderline
THsancontig_3930415220 Alkaloid IO medium borderline
THsancontig_3940415590 Alkaloid IO medium borderline
THsancontig_3990420510 Alkaloid IO medium borderline
THsancontig_4030431410 Alkaloid IO low borderline
THsancontig_4030431430 Alkaloid IO low borderline
THsancontig_4030431450 Alkaloid IO low borderline
THsancontig_4070441510 Alkaloid IO medium borderline
THsancontig_540470180 Alkaloid IO low borderline
THsancontig_570478400 Alkaloid IO medium borderline
THsancontig_600491910 Alkaloid IO medium borderline
THsancontig_760508000 Alkaloid IO medium borderline
THsancontig_860519610 Alkaloid IO medium borderline
THsancontig_950523300 Alkaloid IO low borderline
THsancontig_980526140 Alkaloid IO low borderline
THsancontig_2880260270 Alkaloid ISY medium pass
THsancontig_3260317840 Alkaloid ISY medium pass
THsancontig_1140022820 Alkaloid LAMT medium borderline
THsancontig_1140023100 Alkaloid LAMT medium borderline
THsancontig_1630085980 Alkaloid LAMT medium pass
THsancontig_2190173990 Alkaloid LAMT medium pass
THsancontig_2480194960 Alkaloid LAMT medium borderline
THsancontig_3080290050 Alkaloid LAMT medium pass
THsancontig_360376610 Alkaloid LAMT medium borderline
THsancontig_360376930 Alkaloid LAMT medium borderline
THsancontig_390413580 Alkaloid LAMT medium pass
THsancontig_520468940 Alkaloid LAMT low borderline
THsancontig_880520000 Alkaloid LAMT medium borderline
THsancontig_1220038170 Alkaloid MPO high pass
THsancontig_1410066470 Alkaloid MPO medium pass
THsancontig_3550369890 Alkaloid MPO low borderline
THsancontig_3680382050 Alkaloid MPO medium pass
THsancontig_3840408090 Alkaloid MPO medium pass
THsancontig_3840408100 Alkaloid MPO low borderline
THsancontig_460453600 Alkaloid MPO high pass
THsancontig_840513970 Alkaloid MPO high pass
THsancontig_1140021700 Alkaloid NCS medium borderline
THsancontig_1370061310 Alkaloid NCS low borderline
THsancontig_1990136670 Alkaloid NCS medium borderline