PlantSME Plant secondary metabolism enzyme database

Trochodendron aralioides (trochodendron_aralioides)

Imported from atlas release summary for Trochodendron aralioides.

1938
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 581 19 UGT (216) View species results
Alkaloid pathway 438 25 7DLGT (92) View species results
Phenylpropanoid pathway 364 11 POD (142) View species results
Flavonoid pathway 295 12 UFGT (188) View species results
Rosmarinic acid pathway 150 7 C4H (58) View species results
Steroid pathway 110 12 CAS (44) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1518 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 330 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
evm.model.contig646.4 Alkaloid GS high pass
evm.model.contig797.4 Alkaloid GS low borderline
evm.model.group1.1648 Alkaloid GS low borderline
evm.model.group1.1652 Alkaloid GS low borderline
evm.model.group1.3310 Alkaloid GS low borderline
evm.model.group11.1383 Alkaloid GS high pass
evm.model.group11.433 Alkaloid GS high pass
evm.model.group12.1495 Alkaloid GS low borderline
evm.model.group12.28 Alkaloid GS high pass
evm.model.group12.440 Alkaloid GS low borderline
evm.model.group12.441 Alkaloid GS low borderline
evm.model.group12.637 Alkaloid GS low borderline
evm.model.group14.1307 Alkaloid GS low borderline
evm.model.group14.964 Alkaloid GS high pass
evm.model.group15.1095 Alkaloid GS medium pass
evm.model.group15.1099 Alkaloid GS medium pass
evm.model.group15.1699 Alkaloid GS high pass
evm.model.group15.819 Alkaloid GS low borderline
evm.model.group16.1240 Alkaloid GS medium pass
evm.model.group16.1255 Alkaloid GS high pass
evm.model.group17.1360 Alkaloid GS low borderline
evm.model.group17.1514 Alkaloid GS medium pass
evm.model.group18.287 Alkaloid GS low borderline
evm.model.group3.1609 Alkaloid GS low borderline
evm.model.group3.1610 Alkaloid GS low borderline
evm.model.group3.2940 Alkaloid GS high pass
evm.model.group4.1037 Alkaloid GS high pass
evm.model.group4.1450 Alkaloid GS low borderline
evm.model.group4.1790 Alkaloid GS high pass
evm.model.group5.1380 Alkaloid GS high pass
evm.model.group5.1382 Alkaloid GS high pass
evm.model.group5.1389 Alkaloid GS high pass
evm.model.group5.1392 Alkaloid GS high pass
evm.model.group5.1393 Alkaloid GS high pass
evm.model.group5.1694 Alkaloid GS high pass
evm.model.group5.2309 Alkaloid GS low borderline
evm.model.group5.2369 Alkaloid GS high pass
evm.model.group5.816 Alkaloid GS high pass
evm.model.group6.1105 Alkaloid GS low borderline
evm.model.group8.1529_evm.model.group8.1530 Alkaloid GS low borderline