PlantSME Plant secondary metabolism enzyme database

Vigna radiata (vigna_radiata)

Imported from atlas release summary for Vigna radiata.

1069
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 17 BAHD (136) View species results
Alkaloid pathway 241 18 NMT (40) View species results
Phenylpropanoid pathway 239 11 POD (108) View species results
Flavonoid pathway 127 11 UFGT (74) View species results
Rosmarinic acid pathway 86 7 4CL (23) View species results
Steroid pathway 66 10 SMT1/SMT2/SMT3 (27) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 781 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 237 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Vrad01G0008030.1 Flavonoid F3H low borderline
Vrad01G0008140.1 Flavonoid F3H medium borderline
Vrad01G0014750.1 Flavonoid F3H medium borderline
Vrad02G0002630.1 Flavonoid F3H medium borderline
Vrad03G0010180.1 Flavonoid F3H medium borderline
Vrad04G0000940.1 Flavonoid F3H medium borderline
Vrad04G0003870.1 Flavonoid F3H low borderline
Vrad04G0006730.1 Flavonoid F3H low borderline
Vrad04G0008190.1 Flavonoid F3H medium pass
Vrad04G0009490.1 Flavonoid F3H medium borderline
Vrad05G0001160.1 Flavonoid F3H medium borderline
Vrad05G0006280.1 Flavonoid F3H medium borderline
Vrad05G0015120.1 Flavonoid F3H low borderline
Vrad05G0018070.1 Flavonoid F3H medium borderline
Vrad05G0019220.1 Flavonoid F3H medium borderline
Vrad05G0019260.1 Flavonoid F3H medium borderline
Vrad06G0004460.1 Flavonoid F3H medium borderline
Vrad06G0004940.1 Flavonoid F3H medium pass
Vrad06G0008770.1 Flavonoid F3H medium borderline
Vrad06G0010620.1 Flavonoid F3H medium borderline
Vrad06G0011030.1 Flavonoid F3H medium borderline
Vrad06G0011580.1 Flavonoid F3H medium pass
Vrad06G0011630.1 Flavonoid F3H low borderline
Vrad06G0011920.1 Flavonoid F3H medium borderline
Vrad06G0012620.1 Flavonoid F3H medium borderline
Vrad07G0001230.1 Flavonoid F3H medium borderline
Vrad07G0003310.1 Flavonoid F3H low borderline
Vrad07G0005860.1 Flavonoid F3H low borderline
Vrad07G0008900.1 Flavonoid F3H medium borderline
Vrad07G0008940.1 Flavonoid F3H medium borderline
Vrad07G0009410.1 Flavonoid F3H medium borderline
Vrad07G0010740.1 Flavonoid F3H low borderline
Vrad07G0012350.1 Flavonoid F3H low borderline
Vrad07G0020730.1 Flavonoid F3H medium borderline
Vrad07G0024380.1 Flavonoid F3H medium pass
Vrad07G0029030.1 Flavonoid F3H medium borderline
Vrad08G0002780.1 Flavonoid F3H low borderline
Vrad08G0002800.1 Flavonoid F3H low borderline
Vrad08G0002810.1 Flavonoid F3H low borderline
Vrad08G0006210.1 Flavonoid F3H medium borderline
Vrad08G0006870.1 Flavonoid F3H medium borderline
Vrad08G0013100.1 Flavonoid F3H medium borderline
Vrad08G0019270.1 Flavonoid F3H medium pass
Vrad09G0001000.1 Flavonoid F3H low borderline
Vrad09G0001530.1 Flavonoid F3H low borderline
Vrad09G0002900.1 Flavonoid F3H medium borderline
Vrad09G0006520.1 Flavonoid F3H medium borderline
Vrad09G0007720.1 Flavonoid F3H low borderline
Vrad09G0009590.1 Flavonoid F3H medium borderline
Vrad10G0001200.1 Flavonoid F3H medium borderline