PlantSME Plant secondary metabolism enzyme database

Vigna radiata (vigna_radiata)

Imported from atlas release summary for Vigna radiata.

1069
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 17 BAHD (136) View species results
Alkaloid pathway 241 18 NMT (40) View species results
Phenylpropanoid pathway 239 11 POD (108) View species results
Flavonoid pathway 127 11 UFGT (74) View species results
Rosmarinic acid pathway 86 7 4CL (23) View species results
Steroid pathway 66 10 SMT1/SMT2/SMT3 (27) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 781 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 237 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Vrad10G0004180.1 Flavonoid F3H medium borderline
Vrad10G0006260.1 Flavonoid F3H medium borderline
Vrad10G0007740.1 Flavonoid F3H medium borderline
Vrad10G0007830.1 Flavonoid F3H medium borderline
Vrad10G0009560.1 Flavonoid F3H medium borderline
Vrad11G0000470.1 Flavonoid F3H medium borderline
Vrad11G0002530.1 Flavonoid F3H medium borderline
Vrad11G0007450.1 Flavonoid F3H low borderline
Vrad11G0009910.1 Flavonoid F3H medium borderline
Vrad11G0011370.1 Flavonoid F3H medium borderline
Vrad11G0011380.1 Flavonoid F3H medium borderline
Vrad11G0011500.1 Flavonoid F3H medium borderline
Vrad11G0013070.1 Flavonoid F3H medium borderline
Vrad11G0013110.1 Flavonoid F3H low borderline
Vradscaffold_1540005510.1 Flavonoid F3H low borderline
Vradscaffold_1540005520.1 Flavonoid F3H low borderline
Vradscaffold_1840010370.1 Flavonoid F3H medium borderline
Vradscaffold_1900011000.1 Flavonoid F3H medium borderline
Vradscaffold_1940011250.1 Flavonoid F3H medium borderline
Vradscaffold_2010012020.1 Flavonoid F3H medium borderline
Vradscaffold_2150013470.1 Flavonoid F3H medium borderline
Vradscaffold_230015390.1 Flavonoid F3H medium borderline
Vradscaffold_230015400.1 Flavonoid F3H medium borderline
Vradscaffold_2970021450.1 Flavonoid F3H medium borderline
Vradscaffold_3050022220.1 Flavonoid F3H medium pass
Vradscaffold_3880027350.1 Flavonoid F3H medium borderline
Vradscaffold_5990033320.1 Flavonoid F3H medium borderline
Vrad05G0020640.1 Flavonoid FLS low borderline
Vrad01G0004400.1 Flavonoid FNS medium borderline
Vrad01G0014600.1 Flavonoid FNS medium borderline
Vrad01G0014640.1 Flavonoid FNS medium borderline
Vrad03G0001950.1 Flavonoid FNS medium borderline
Vrad06G0013940.1 Flavonoid FNS medium borderline
Vrad06G0015750.1 Flavonoid FNS medium borderline
Vrad07G0003690.1 Flavonoid FNS medium borderline
Vrad07G0004600.1 Flavonoid FNS medium borderline
Vrad07G0004640.1 Flavonoid FNS medium borderline
Vrad07G0014480.1 Flavonoid FNS medium borderline
Vrad09G0005450.1 Flavonoid FNS medium borderline
Vrad11G0008080.1 Flavonoid FNS medium borderline
Vradscaffold_2980021560.1 Flavonoid FNS medium borderline
Vrad02G0003280.1 Flavonoid IFR medium pass
Vrad02G0003560.1 Flavonoid IFR low borderline
Vrad05G0011190.1 Flavonoid IFR low borderline
Vrad05G0012800.1 Flavonoid IFR medium borderline
Vrad05G0013310.1 Flavonoid IFR high pass
Vrad05G0015840.1 Flavonoid IFR low borderline
Vrad05G0021730.1 Flavonoid IFR low borderline
Vrad05G0021740.1 Flavonoid IFR low borderline
Vrad07G0002160.1 Flavonoid IFR high pass