CHS

Chalcone synthase reference family for the core flavonoid pathway.

Lineage Coverage

Detected in 757 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Flavonoid pathway 11738 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010

Phenylpropanoid entry

PAL 7015 C4H 464 4CL 25907

Flavonoid scaffold formation

CHS 11738 CHI 3089

Flavone and isoflavonoid branches

FNS 359 IFS 541 IFR 11814

Dihydroflavonol branches

F3H 4697 F3'H/CYP75B 1332 F3'5'H/CYP75A 247 FLS 124

Anthocyanin and proanthocyanidin branches

DFR 1310 ANS/LDOX 1019 UFGT 106747 ANR 1183

Family Gene List

Gene	Species	Protein ID
Bca_GomC09g04060.mRNA1	brassica_carinata	Bca_GomC09g04060.mRNA1
Bca_GomC09g14730.mRNA1	brassica_carinata	Bca_GomC09g14730.mRNA1
Bca_GomC09g16290.mRNA1	brassica_carinata	Bca_GomC09g16290.mRNA1
Bca_GomC09g18150.mRNA1	brassica_carinata	Bca_GomC09g18150.mRNA1
Bca_GomC09g50950.mRNA1	brassica_carinata	Bca_GomC09g50950.mRNA1
Bca_GomC09g51050.mRNA1	brassica_carinata	Bca_GomC09g51050.mRNA1
Bca_GomC09g51460.mRNA1	brassica_carinata	Bca_GomC09g51460.mRNA1
Bca_GomC09g51470.mRNA1	brassica_carinata	Bca_GomC09g51470.mRNA1
Bca_GomC09g60660.mRNA1	brassica_carinata	Bca_GomC09g60660.mRNA1
Bca_GomC09g61020.mRNA1	brassica_carinata	Bca_GomC09g61020.mRNA1
BjunA01G0003220	brassica_juncea	BjunA01G0003220
BjunA02G0004800	brassica_juncea	BjunA02G0004800
BjunA02G0017460	brassica_juncea	BjunA02G0017460
BjunA02G0024450	brassica_juncea	BjunA02G0024450
BjunA02G0025000	brassica_juncea	BjunA02G0025000
BjunA02G0032010	brassica_juncea	BjunA02G0032010
BjunA02G0032030	brassica_juncea	BjunA02G0032030
BjunA02G0032220	brassica_juncea	BjunA02G0032220
BjunA03G0004750	brassica_juncea	BjunA03G0004750
BjunA03G0021400	brassica_juncea	BjunA03G0021400
BjunA03G0037510	brassica_juncea	BjunA03G0037510
BjunA03G0040140	brassica_juncea	BjunA03G0040140
BjunA03G0050110	brassica_juncea	BjunA03G0050110
BjunA03G0050460	brassica_juncea	BjunA03G0050460
BjunA04G0015180	brassica_juncea	BjunA04G0015180
BjunA04G0016350	brassica_juncea	BjunA04G0016350
BjunA04G0021430	brassica_juncea	BjunA04G0021430
BjunA06G0011880	brassica_juncea	BjunA06G0011880
BjunA06G0015320	brassica_juncea	BjunA06G0015320
BjunA06G0035220	brassica_juncea	BjunA06G0035220