PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
BjunA01G0015620 Alkaloid 16OMT medium borderline
BjunA02G0012210 Alkaloid 16OMT medium borderline
BjunA03G0046510 Alkaloid 16OMT medium borderline
BjunA03G0050610 Alkaloid 16OMT medium borderline
BjunA05G0017370 Alkaloid 16OMT low borderline
BjunA06G0013200 Alkaloid 16OMT medium borderline
BjunA06G0013210 Alkaloid 16OMT medium borderline
BjunA07G0011120 Alkaloid 16OMT medium borderline
BjunA07G0011130 Alkaloid 16OMT medium borderline
BjunA07G0030880 Alkaloid 16OMT medium borderline
BjunA09G0021510 Alkaloid 16OMT medium borderline
BjunB02G0015050 Alkaloid 16OMT medium borderline
BjunB02G0051870 Alkaloid 16OMT medium borderline
BjunB02G0055050 Alkaloid 16OMT medium borderline
BjunB03G0015360 Alkaloid 16OMT medium borderline
BjunB03G0024370 Alkaloid 16OMT medium borderline
BjunB03G0024400 Alkaloid 16OMT medium borderline
BjunB03G0043810 Alkaloid 16OMT medium borderline
BjunB05G0009310 Alkaloid 16OMT medium borderline
BjunB08G0010910 Alkaloid 16OMT medium borderline
BjunB08G0012190 Alkaloid 16OMT medium borderline
BjunB08G0045370 Alkaloid 16OMT medium borderline
BjunContig1663_1_3370470011910 Alkaloid 16OMT medium borderline
BjunContig1968_75223_1868820014350 Alkaloid 16OMT medium borderline
BjunA07G0012790 Alkaloid 6OMT_4OMT_SOMT low borderline
BjunB02G0055640 Alkaloid 6OMT_4OMT_SOMT medium borderline
BjunB03G0015350 Alkaloid 6OMT_4OMT_SOMT low borderline
BjunA01G0000970 Alkaloid 7DLGT low borderline
BjunA01G0003310 Alkaloid 7DLGT low borderline
BjunA01G0003320 Alkaloid 7DLGT low borderline
BjunA01G0003330 Alkaloid 7DLGT low borderline
BjunA01G0017780 Alkaloid 7DLGT medium pass
BjunA01G0017850 Alkaloid 7DLGT medium pass
BjunA01G0017860 Alkaloid 7DLGT low borderline
BjunA01G0017890 Alkaloid 7DLGT low borderline
BjunA01G0017900 Alkaloid 7DLGT low borderline
BjunA01G0018050 Alkaloid 7DLGT low borderline
BjunA01G0020060 Alkaloid 7DLGT medium pass
BjunA01G0023230 Alkaloid 7DLGT medium pass
BjunA01G0025720 Alkaloid 7DLGT low borderline
BjunA01G0025960 Alkaloid 7DLGT medium pass
BjunA01G0025980 Alkaloid 7DLGT medium pass
BjunA01G0026080 Alkaloid 7DLGT low borderline
BjunA02G0006070 Alkaloid 7DLGT low borderline
BjunA02G0012280 Alkaloid 7DLGT low borderline
BjunA02G0012290 Alkaloid 7DLGT low borderline
BjunA02G0020680 Alkaloid 7DLGT medium pass
BjunA02G0022880 Alkaloid 7DLGT medium pass
BjunA03G0001990 Alkaloid 7DLGT high pass
BjunA03G0005170 Alkaloid 7DLGT low borderline