PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
Reset
Gene Pathway Family Confidence Status
BjunA01G0000580 Alkaloid IO medium pass
BjunA01G0001430 Alkaloid IO medium borderline
BjunA02G0015870 Alkaloid IO medium borderline
BjunA03G0001490 Alkaloid IO medium borderline
BjunA03G0021390 Alkaloid IO medium borderline
BjunA03G0024060 Alkaloid IO medium borderline
BjunA03G0037100 Alkaloid IO medium borderline
BjunA03G0051790 Alkaloid IO medium borderline
BjunA04G0005040 Alkaloid IO medium borderline
BjunA04G0010700 Alkaloid IO low borderline
BjunA04G0011870 Alkaloid IO medium borderline
BjunA04G0017300 Alkaloid IO medium borderline
BjunA04G0025450 Alkaloid IO medium borderline
BjunA05G0000910 Alkaloid IO medium borderline
BjunA05G0011040 Alkaloid IO low borderline
BjunA05G0014070 Alkaloid IO medium borderline
BjunA05G0027100 Alkaloid IO medium borderline
BjunA06G0008530 Alkaloid IO medium borderline
BjunA06G0014940 Alkaloid IO medium borderline
BjunA07G0006900 Alkaloid IO medium borderline
BjunA09G0040970 Alkaloid IO medium borderline
BjunA09G0053900 Alkaloid IO medium borderline
BjunA09G0053920 Alkaloid IO medium borderline
BjunA10G0004210 Alkaloid IO medium borderline
BjunA10G0023020 Alkaloid IO medium borderline
BjunB01G0001510 Alkaloid IO medium borderline
BjunB01G0017580 Alkaloid IO medium pass
BjunB01G0021710 Alkaloid IO low borderline
BjunB01G0034410 Alkaloid IO medium borderline
BjunB02G0029930 Alkaloid IO medium borderline
BjunB02G0032970 Alkaloid IO medium borderline
BjunB02G0043050 Alkaloid IO low borderline
BjunB02G0056390 Alkaloid IO medium pass
BjunB03G0006860 Alkaloid IO low borderline
BjunB03G0029500 Alkaloid IO high pass
BjunB03G0029540 Alkaloid IO medium borderline
BjunB04G0008590 Alkaloid IO low borderline
BjunB04G0023540 Alkaloid IO medium borderline
BjunB04G0035890 Alkaloid IO medium borderline
BjunB05G0001050 Alkaloid IO medium borderline
BjunB05G0001070 Alkaloid IO medium borderline
BjunB06G0011880 Alkaloid IO medium borderline
BjunB06G0017180 Alkaloid IO medium borderline
BjunB06G0032860 Alkaloid IO medium borderline
BjunB06G0037310 Alkaloid IO medium borderline
BjunB07G0028520 Alkaloid IO medium borderline
BjunB08G0025180 Alkaloid IO medium borderline
BjunB08G0035020 Alkaloid IO medium borderline
BjunContig12320005220 Alkaloid IO medium borderline
BjunContig668_1_4839870044250 Alkaloid IO medium pass