PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPR
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Gene Pathway Family Confidence Status Best Target
BjunA01G0005830 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
BjunA01G0012860 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
BjunA01G0012870 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
BjunA01G0019530 Rosmarinic Acid CPR low borderline CPR__00009__sp_Q9SUM3_NCPR2_ARATH
BjunA01G0022050 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
BjunA01G0029880 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
BjunA03G0019270 Rosmarinic Acid CPR low borderline CPR__00007__sp_Q96327_EBP1_ARATH
BjunA03G0026350 Rosmarinic Acid CPR medium pass CPR__00003__sp_C5YJG8_NCPR_SORBI
BjunA03G0040310 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
BjunA03G0044900 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
BjunA03G0047910 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
BjunA08G0014050 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
BjunA09G0007470 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
BjunA09G0033140 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
BjunB02G0001740 Rosmarinic Acid CPR low borderline CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
BjunB02G0001760 Rosmarinic Acid CPR low borderline CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
BjunB02G0046460 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
BjunB02G0050190 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
BjunB04G0016720 Rosmarinic Acid CPR low borderline CPR__00009__sp_Q9SUM3_NCPR2_ARATH
BjunB04G0031970 Rosmarinic Acid CPR low borderline CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
BjunB05G0007410 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
BjunB05G0007630 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
BjunB05G0011840 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
BjunB05G0021040 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
BjunB07G0012970 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
BjunB07G0018110 Rosmarinic Acid CPR medium pass CPR__00004__sp_Q0J705_NCPR2_ORYSJ
BjunB08G0023890 Rosmarinic Acid CPR low borderline CPR__00007__sp_Q96327_EBP1_ARATH
BjunB08G0043020 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
BjunContig32960026040 Rosmarinic Acid CPR medium pass CPR__00004__sp_Q0J705_NCPR2_ORYSJ
BjunContig427_373084_6393910032780 Rosmarinic Acid CPR low borderline CPR__00008__sp_Q9SB48_NCPR1_ARATH
BjunContig79090048690 Rosmarinic Acid CPR low borderline CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
BjunContig82090049130 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
BjunSuper_scaffold_184_753382_15810110060680 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH