PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
BjunA01G0000750 Alkaloid GS high pass
BjunA01G0000760 Alkaloid GS high pass
BjunA01G0003240 Alkaloid GS high pass
BjunA01G0010370 Alkaloid GS low borderline
BjunA03G0012280 Alkaloid GS low borderline
BjunA03G0031630 Alkaloid GS low borderline
BjunA03G0050090 Alkaloid GS high pass
BjunA05G0022570 Alkaloid GS high pass
BjunA06G0020710 Alkaloid GS medium pass
BjunA06G0035910 Alkaloid GS high pass
BjunA07G0017110 Alkaloid GS low borderline
BjunA07G0028110 Alkaloid GS high pass
BjunA08G0004130 Alkaloid GS low borderline
BjunA08G0016620 Alkaloid GS high pass
BjunA08G0016630 Alkaloid GS medium pass
BjunA09G0005970 Alkaloid GS low borderline
BjunA09G0008350 Alkaloid GS low borderline
BjunA09G0016780 Alkaloid GS low borderline
BjunA09G0031430 Alkaloid GS low borderline
BjunA09G0044510 Alkaloid GS high pass
BjunA09G0046530 Alkaloid GS low borderline
BjunA10G0007190 Alkaloid GS medium pass
BjunB01G0001720 Alkaloid GS high pass
BjunB01G0001730 Alkaloid GS medium pass
BjunB01G0001740 Alkaloid GS high pass
BjunB01G0027220 Alkaloid GS high pass
BjunB01G0031280 Alkaloid GS low borderline
BjunB02G0004380 Alkaloid GS high pass
BjunB02G0054330 Alkaloid GS high pass
BjunB02G0056730 Alkaloid GS high pass
BjunB03G0023690 Alkaloid GS low borderline
BjunB03G0041110 Alkaloid GS high pass
BjunB05G0001520 Alkaloid GS high pass
BjunB05G0001530 Alkaloid GS high pass
BjunB05G0013940 Alkaloid GS low borderline
BjunB06G0006650 Alkaloid GS low borderline
BjunB06G0009300 Alkaloid GS medium pass
BjunB07G0001510 Alkaloid GS low borderline
BjunB07G0014370 Alkaloid GS low borderline
BjunB07G0016060 Alkaloid GS low borderline
BjunB07G0025390 Alkaloid GS low borderline
BjunB08G0013030 Alkaloid GS low borderline
BjunContig1663_1_3370470012090 Alkaloid GS medium pass