PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 32.63% Alkaloid pathway 20.85% Phenylpropanoid pathway 20.67% Flavonoid pathway 12.33% Rosmarinic acid pathway 7.71% Steroid pathway 5.82%
Family Distribution
BAHD 7.37% C4H 6.07% C3'H/CYP98A 5.38% POD 4.16% CYP76 4.08% UGT 3.91% 4CL 3.63% F3H 3.43%
Other Families 61.96%
More Families (98)
7DLGT 281 3.37% UFGT 267 3.2% IFS 260 3.12% NMT 230 2.76% T3O 212 2.54% DWF4/CYP90B1 179 2.15% CODM/T6ODM 177 2.12% BR6OX2/CYP85A2 164 1.97% F3'H/CYP75B 161 1.93% H6H 148 1.77% STR 135 1.62% SMT1/SMT2/SMT3 126 1.51% TRI/TRII 121 1.45% CSE 119 1.43% CYP71 105 1.26% T16H 96 1.15% G8O/G8H 90 1.08% PYKS 88 1.06% SGD 87 1.04% BBE 84 1.01% FNS 82 0.98% IFR 81 0.97% CAD 76 0.91% CAS 72 0.86% LAC 70 0.84% TPS 70 0.84% F5H/CYP84A 63 0.76% GES 62 0.74% TAT 60 0.72% HCT 58 0.7% IO 57 0.68% SLS 56 0.67% ANR 55 0.66% F3'5'H/CYP75A 54 0.65% COMT 54 0.65% LAMT 53 0.64% PAL 51 0.61% RAS 50 0.6% CYP90D1 49 0.59% CCR 45 0.54% GS 43 0.52% CPD/CYP90A1 42 0.5% GGPPS 34 0.41% CPR 33 0.4% ANS/LDOX 32 0.38% 8HGO 29 0.35% BR6OX1/CYP85A1 29 0.35% FPPS 28 0.34% 7DLH 25 0.3% CYP51G1 25 0.3% 16OMT 24 0.29% NCS 23 0.28% PMT 23 0.28% CHS 23 0.28% COR 22 0.26% SQE 20 0.24% CNMT 18 0.22% CYP80B1 17 0.2% CCoAOMT 16 0.19% SQS/FDFT1 16 0.19% XMT_MXMT_DXMT 15 0.18% AACT 15 0.18% MVD 14 0.17% CYP719 13 0.16% CYP80F1 13 0.16% HPPR 13 0.16% SMO1/SMO2 13 0.16% MVK 13 0.16% ISY 12 0.14% MPO 12 0.14% TDC 12 0.14% ADC 11 0.13% FLS 11 0.13% DFR 11 0.13% ROT3/CYP90C1 11 0.13% CHI 10 0.12% DWF7 10 0.12% IDI 8 0.1% PMK 8 0.1% DXS 7 0.08% HYD1 6 0.07% MCT/IspD 6 0.07% TYDC_DDC 5 0.06% CPI1 5 0.06% DET2 5 0.06% DWF5 5 0.06% DWF1 5 0.06% HDR/IspH 5 0.06% MDS/IspF 4 0.05% 6OMT_4OMT_SOMT 3 0.04% HDS/IspG 3 0.04% DXR 3 0.04% HMGS 3 0.04% FK 2 0.02% HMGR 2 0.02% ODC 1 0.01% CMK/IspE 1 0.01% GPPS 1 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Gene Pathway Family Confidence Status Best Target
BjunA01G0001910 Terpenoid BAHD low borderline BAHD__00023__sp_O22975_LPAAT_ARATH
BjunA01G0002700 Terpenoid BAHD medium pass BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
BjunA01G0004390 Terpenoid BAHD low borderline BAHD__00012__sp_A1XWY7_CFAT_PETHY
BjunA01G0005300 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
BjunA01G0005320 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
BjunA01G0006120 Terpenoid BAHD medium pass BAHD__00092__sp_Q9SU91_LPXA_ARATH
BjunA01G0011160 Terpenoid BAHD medium pass BAHD__00065__sp_Q94C49_ZDH18_ARATH
BjunA01G0012500 Terpenoid BAHD medium pass BAHD__00023__sp_O22975_LPAAT_ARATH
BjunA01G0012850 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
BjunA01G0013000 Terpenoid BAHD medium pass BAHD__00089__sp_Q9SB58_ZDH19_ARATH
BjunA01G0017410 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
BjunA01G0017880 Terpenoid BAHD medium pass BAHD__00084__sp_Q9M115_ZDH16_ARATH
BjunA01G0018030 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
BjunA01G0018040 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
BjunA01G0018110 Terpenoid BAHD medium pass BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
BjunA01G0019230 Terpenoid BAHD low borderline BAHD__00084__sp_Q9M115_ZDH16_ARATH
BjunA01G0021060 Terpenoid BAHD medium pass BAHD__00087__sp_Q9M3B1_WSD6_ARATH
BjunA01G0021420 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
BjunA01G0021520 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
BjunA01G0021720 Terpenoid BAHD medium pass BAHD__00087__sp_Q9M3B1_WSD6_ARATH
BjunA01G0022170 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
BjunA01G0022260 Terpenoid BAHD medium pass BAHD__00067__sp_Q9ASU1_DGAT2_ARATH
BjunA01G0023460 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
BjunA01G0025250 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
BjunA01G0025660 Terpenoid BAHD medium pass BAHD__00079__sp_Q9LIE4_ZDHC8_ARATH
BjunA01G0031330 Terpenoid BAHD medium pass BAHD__00064__sp_Q93ZR6_WSD1_ARATH
BjunA01G0033410 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
BjunA01G0033420 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
BjunA01G0034020 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
BjunA01G0035130 Terpenoid BAHD medium pass BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
BjunA02G0000420 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
BjunA02G0002400 Terpenoid BAHD low borderline BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
BjunA02G0002840 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
BjunA02G0002850 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
BjunA02G0002860 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
BjunA02G0004030 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
BjunA02G0004130 Terpenoid BAHD medium pass BAHD__00066__sp_Q94CK0_WSD7_ARATH
BjunA02G0004650 Terpenoid BAHD medium pass BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
BjunA02G0005780 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
BjunA02G0005930 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
BjunA02G0007030 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
BjunA02G0007600 Terpenoid BAHD medium pass BAHD__00043__sp_Q52T38_ZDH22_ARATH
BjunA02G0008560 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
BjunA02G0011410 Terpenoid BAHD low borderline BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
BjunA02G0011420 Terpenoid BAHD medium pass BAHD__00093__sp_Q9SV07_ASAT1_ARATH
BjunA02G0011430 Terpenoid BAHD medium pass BAHD__00093__sp_Q9SV07_ASAT1_ARATH
BjunA02G0011440 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
BjunA02G0012600 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
BjunA02G0016620 Terpenoid BAHD medium pass BAHD__00068__sp_Q9C533_ZDHC1_ARATH
BjunA02G0017110 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH