PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
BjunA01G0003220 Alkaloid PYKS low borderline
BjunA01G0035710 Alkaloid PYKS low borderline
BjunA02G0004800 Alkaloid PYKS high pass
BjunA02G0017460 Alkaloid PYKS low borderline
BjunA02G0024450 Alkaloid PYKS low borderline
BjunA02G0025000 Alkaloid PYKS low borderline
BjunA02G0032010 Alkaloid PYKS high pass
BjunA02G0032030 Alkaloid PYKS medium pass
BjunA02G0032220 Alkaloid PYKS low borderline
BjunA03G0004750 Alkaloid PYKS high pass
BjunA03G0021400 Alkaloid PYKS medium pass
BjunA03G0037510 Alkaloid PYKS low borderline
BjunA03G0040140 Alkaloid PYKS low borderline
BjunA03G0050110 Alkaloid PYKS low borderline
BjunA03G0050460 Alkaloid PYKS high pass
BjunA04G0015180 Alkaloid PYKS low borderline
BjunA04G0016350 Alkaloid PYKS low borderline
BjunA04G0021430 Alkaloid PYKS medium pass
BjunA05G0030850 Alkaloid PYKS low borderline
BjunA06G0011880 Alkaloid PYKS low borderline
BjunA06G0015320 Alkaloid PYKS medium pass
BjunA06G0025490 Alkaloid PYKS low borderline
BjunA06G0035220 Alkaloid PYKS low borderline
BjunA07G0003160 Alkaloid PYKS low borderline
BjunA07G0003770 Alkaloid PYKS low borderline
BjunA07G0014170 Alkaloid PYKS low borderline
BjunA07G0022560 Alkaloid PYKS low borderline
BjunA08G0011140 Alkaloid PYKS high pass
BjunA08G0025930 Alkaloid PYKS low borderline
BjunA08G0027210 Alkaloid PYKS low borderline
BjunA09G0009100 Alkaloid PYKS low borderline
BjunA09G0012540 Alkaloid PYKS low borderline
BjunA09G0030010 Alkaloid PYKS low borderline
BjunA09G0030760 Alkaloid PYKS low borderline
BjunA09G0042310 Alkaloid PYKS low borderline
BjunA09G0045660 Alkaloid PYKS low borderline
BjunA09G0053880 Alkaloid PYKS low borderline
BjunA10G0004170 Alkaloid PYKS low borderline
BjunA10G0005690 Alkaloid PYKS low borderline
BjunA10G0017700 Alkaloid PYKS high pass
BjunA10G0023290 Alkaloid PYKS low borderline
BjunA10G0023530 Alkaloid PYKS low borderline
BjunA10G0024840 Alkaloid PYKS high pass
BjunB01G0007050 Alkaloid PYKS high pass
BjunB01G0013000 Alkaloid PYKS low borderline
BjunB01G0014090 Alkaloid PYKS low borderline
BjunB01G0037290 Alkaloid PYKS low borderline
BjunB02G0000880 Alkaloid PYKS low borderline
BjunB02G0008410 Alkaloid PYKS low borderline
BjunB02G0033320 Alkaloid PYKS low borderline