PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPD/CYP90A1
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Gene Pathway Family Confidence Status
BjunA01G0010100 Steroid CPD/CYP90A1 low borderline
BjunA02G0000040 Steroid CPD/CYP90A1 medium borderline
BjunA02G0030840 Steroid CPD/CYP90A1 medium borderline
BjunA03G0051790 Steroid CPD/CYP90A1 low borderline
BjunA06G0009540 Steroid CPD/CYP90A1 low borderline
BjunA06G0014760 Steroid CPD/CYP90A1 low borderline
BjunA06G0018620 Steroid CPD/CYP90A1 low borderline
BjunA06G0020300 Steroid CPD/CYP90A1 low borderline
BjunA07G0013040 Steroid CPD/CYP90A1 medium borderline
BjunA07G0016080 Steroid CPD/CYP90A1 medium borderline
BjunA08G0024280 Steroid CPD/CYP90A1 low borderline
BjunA09G0015610 Steroid CPD/CYP90A1 medium borderline
BjunA09G0015640 Steroid CPD/CYP90A1 medium borderline
BjunA09G0034700 Steroid CPD/CYP90A1 medium borderline
BjunA09G0037830 Steroid CPD/CYP90A1 low borderline
BjunB01G0001500 Steroid CPD/CYP90A1 low borderline
BjunB01G0009230 Steroid CPD/CYP90A1 low borderline
BjunB02G0038790 Steroid CPD/CYP90A1 medium borderline
BjunB02G0038800 Steroid CPD/CYP90A1 medium borderline
BjunB02G0056090 Steroid CPD/CYP90A1 medium borderline
BjunB02G0056690 Steroid CPD/CYP90A1 low borderline
BjunB03G0004260 Steroid CPD/CYP90A1 low borderline
BjunB03G0006210 Steroid CPD/CYP90A1 low borderline
BjunB03G0035510 Steroid CPD/CYP90A1 medium borderline
BjunB04G0004500 Steroid CPD/CYP90A1 medium borderline
BjunB04G0007540 Steroid CPD/CYP90A1 medium borderline
BjunB04G0013040 Steroid CPD/CYP90A1 medium borderline
BjunB04G0013150 Steroid CPD/CYP90A1 low borderline
BjunB04G0023020 Steroid CPD/CYP90A1 low borderline
BjunB05G0024510 Steroid CPD/CYP90A1 medium borderline
BjunB06G0009150 Steroid CPD/CYP90A1 low borderline
BjunB06G0012980 Steroid CPD/CYP90A1 medium borderline
BjunB06G0030930 Steroid CPD/CYP90A1 medium borderline
BjunB06G0032900 Steroid CPD/CYP90A1 medium borderline
BjunB07G0012730 Steroid CPD/CYP90A1 low borderline
BjunB07G0016680 Steroid CPD/CYP90A1 low borderline
BjunB08G0034260 Steroid CPD/CYP90A1 low borderline
BjunContig5330039500 Steroid CPD/CYP90A1 low borderline
BjunContig5330039510 Steroid CPD/CYP90A1 low borderline
BjunSuper_scaffold_1280056890 Steroid CPD/CYP90A1 low borderline
BjunSuper_scaffold_144_1249783_34209240057900 Steroid CPD/CYP90A1 low borderline
BjunSuper_scaffold_730070310 Steroid CPD/CYP90A1 low borderline