PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FPPS
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Gene Pathway Family Confidence Status Best Target
BjunA01G0009690 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunA02G0009650 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunA02G0009660 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunA02G0023870 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunA02G0027580 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
BjunA03G0021100 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunA04G0020750 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunA06G0022660 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunA06G0032670 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
BjunA10G0011330 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunA10G0011340 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunA10G0012730 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunA10G0012740 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunB01G0007700 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunB02G0002620 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunB02G0021540 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunB02G0021970 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunB03G0048700 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunB04G0006170 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
BjunB04G0027140 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunB04G0027150 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunB05G0036770 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunContig16620011880 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
BjunContig17290012880 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunContig17290012890 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
BjunSuper_scaffold_40_2508543_4711922_1153965_22033800065730 Terpenoid FPPS medium borderline FPPS__00004__sp_O22043_GGPP6_ARATH
BjunSuper_scaffold_40_2508543_4711922_1153965_22033800065750 Terpenoid FPPS medium borderline FPPS__00004__sp_O22043_GGPP6_ARATH
BjunSuper_scaffold_40_2508543_4711922_1153965_22033800065780 Terpenoid FPPS low borderline FPPS__00004__sp_O22043_GGPP6_ARATH