PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
BjunA01G0002270 Rosmarinic Acid RAS low borderline
BjunA01G0016380 Rosmarinic Acid RAS low borderline
BjunA01G0017410 Rosmarinic Acid RAS medium borderline
BjunA01G0022150 Rosmarinic Acid RAS low borderline
BjunA02G0009470 Rosmarinic Acid RAS low borderline
BjunA02G0028360 Rosmarinic Acid RAS low borderline
BjunA03G0009620 Rosmarinic Acid RAS medium pass
BjunA03G0009630 Rosmarinic Acid RAS medium pass
BjunA03G0014480 Rosmarinic Acid RAS low borderline
BjunA04G0022470 Rosmarinic Acid RAS medium pass
BjunA05G0004640 Rosmarinic Acid RAS low borderline
BjunA05G0005640 Rosmarinic Acid RAS low borderline
BjunA05G0024180 Rosmarinic Acid RAS low borderline
BjunA06G0023390 Rosmarinic Acid RAS medium pass
BjunA06G0033940 Rosmarinic Acid RAS low borderline
BjunA07G0000540 Rosmarinic Acid RAS medium pass
BjunA07G0011650 Rosmarinic Acid RAS low borderline
BjunA07G0015200 Rosmarinic Acid RAS medium pass
BjunA07G0020870 Rosmarinic Acid RAS low borderline
BjunA07G0030160 Rosmarinic Acid RAS low borderline
BjunA09G0009630 Rosmarinic Acid RAS low borderline
BjunA09G0010000 Rosmarinic Acid RAS medium pass
BjunA09G0029180 Rosmarinic Acid RAS medium pass
BjunA10G0020620 Rosmarinic Acid RAS low borderline
BjunB01G0005730 Rosmarinic Acid RAS medium pass
BjunB01G0018570 Rosmarinic Acid RAS medium pass
BjunB01G0019590 Rosmarinic Acid RAS low borderline
BjunB01G0021640 Rosmarinic Acid RAS low borderline
BjunB01G0029120 Rosmarinic Acid RAS low borderline
BjunB01G0030840 Rosmarinic Acid RAS low borderline
BjunB02G0009370 Rosmarinic Acid RAS medium pass
BjunB02G0031570 Rosmarinic Acid RAS low borderline
BjunB03G0039290 Rosmarinic Acid RAS low borderline
BjunB03G0047400 Rosmarinic Acid RAS medium pass
BjunB04G0001080 Rosmarinic Acid RAS low borderline
BjunB04G0001110 Rosmarinic Acid RAS low borderline
BjunB04G0018610 Rosmarinic Acid RAS medium pass
BjunB04G0019260 Rosmarinic Acid RAS low borderline
BjunB05G0002890 Rosmarinic Acid RAS low borderline
BjunB05G0043800 Rosmarinic Acid RAS low borderline
BjunB06G0002450 Rosmarinic Acid RAS low borderline
BjunB06G0003470 Rosmarinic Acid RAS low borderline
BjunB06G0014220 Rosmarinic Acid RAS low borderline
BjunB06G0014890 Rosmarinic Acid RAS medium pass
BjunB08G0009520 Rosmarinic Acid RAS low borderline
BjunB08G0009660 Rosmarinic Acid RAS low borderline
BjunB08G0039690 Rosmarinic Acid RAS medium pass
BjunB08G0042730 Rosmarinic Acid RAS low borderline
BjunContig12070004690 Rosmarinic Acid RAS medium pass
BjunSuper_scaffold_127_1637425_3570875_164068_4227960056220 Rosmarinic Acid RAS low borderline