PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
BjunA01G0018000 Flavonoid C4H low borderline
BjunA03G0013400 Flavonoid C4H medium borderline
BjunA03G0024020 Flavonoid C4H low borderline
BjunA03G0039880 Flavonoid C4H low borderline
BjunA04G0017290 Flavonoid C4H medium borderline
BjunA04G0017300 Flavonoid C4H medium borderline
BjunA05G0012280 Flavonoid C4H medium borderline
BjunA06G0025190 Flavonoid C4H medium borderline
BjunA07G0016180 Flavonoid C4H low borderline
BjunA09G0002380 Flavonoid C4H low borderline
BjunA09G0047490 Flavonoid C4H low borderline
BjunB01G0001490 Flavonoid C4H low borderline
BjunB01G0011880 Flavonoid C4H medium borderline
BjunB01G0011890 Flavonoid C4H medium borderline
BjunB02G0002920 Flavonoid C4H medium borderline
BjunB02G0046050 Flavonoid C4H low borderline
BjunB04G0008690 Flavonoid C4H low borderline
BjunB04G0009640 Flavonoid C4H low borderline
BjunB04G0012670 Flavonoid C4H low borderline
BjunB06G0030830 Flavonoid C4H low borderline
BjunB08G0014040 Flavonoid C4H medium borderline
BjunB08G0014050 Flavonoid C4H medium borderline
BjunB08G0024840 Flavonoid C4H low borderline
BjunSuper_scaffold_750071200 Flavonoid C4H medium borderline
BjunA01G0000220 Rosmarinic Acid C4H low borderline
BjunA01G0000580 Rosmarinic Acid C4H low borderline
BjunA01G0001380 Rosmarinic Acid C4H low borderline
BjunA01G0001390 Rosmarinic Acid C4H medium pass
BjunA01G0001400 Rosmarinic Acid C4H low borderline
BjunA01G0001420 Rosmarinic Acid C4H medium pass
BjunA01G0001430 Rosmarinic Acid C4H low borderline
BjunA01G0001450 Rosmarinic Acid C4H low borderline
BjunA01G0001460 Rosmarinic Acid C4H low borderline
BjunA01G0002000 Rosmarinic Acid C4H low borderline
BjunA01G0004880 Rosmarinic Acid C4H medium pass
BjunA01G0004900 Rosmarinic Acid C4H low borderline
BjunA01G0008800 Rosmarinic Acid C4H low borderline
BjunA01G0009580 Rosmarinic Acid C4H low borderline
BjunA01G0017610 Rosmarinic Acid C4H medium pass
BjunA01G0018000 Rosmarinic Acid C4H low borderline
BjunA01G0019460 Rosmarinic Acid C4H low borderline
BjunA01G0020360 Rosmarinic Acid C4H low borderline
BjunA01G0020400 Rosmarinic Acid C4H low borderline
BjunA01G0020410 Rosmarinic Acid C4H low borderline
BjunA01G0024780 Rosmarinic Acid C4H low borderline
BjunA01G0025130 Rosmarinic Acid C4H low borderline
BjunA01G0032820 Rosmarinic Acid C4H low borderline
BjunA02G0001610 Rosmarinic Acid C4H low borderline
BjunA02G0001750 Rosmarinic Acid C4H low borderline
BjunA02G0002110 Rosmarinic Acid C4H low borderline