PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 8HGO
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Gene Pathway Family Confidence Status
BjunA02G0033750 Alkaloid 8HGO medium borderline
BjunA05G0018410 Alkaloid 8HGO medium borderline
BjunA06G0006000 Alkaloid 8HGO low borderline
BjunA06G0035100 Alkaloid 8HGO medium borderline
BjunA07G0010610 Alkaloid 8HGO medium borderline
BjunA07G0020500 Alkaloid 8HGO medium borderline
BjunA07G0031080 Alkaloid 8HGO medium borderline
BjunA07G0031170 Alkaloid 8HGO medium borderline
BjunA08G0020390 Alkaloid 8HGO medium borderline
BjunA09G0017330 Alkaloid 8HGO medium borderline
BjunA09G0017670 Alkaloid 8HGO medium borderline
BjunA09G0032420 Alkaloid 8HGO medium pass
BjunA09G0032430 Alkaloid 8HGO medium borderline
BjunA09G0035320 Alkaloid 8HGO medium borderline
BjunB02G0004270 Alkaloid 8HGO medium borderline
BjunB02G0036590 Alkaloid 8HGO medium borderline
BjunB02G0037510 Alkaloid 8HGO medium borderline
BjunB02G0038070 Alkaloid 8HGO medium borderline
BjunB03G0021150 Alkaloid 8HGO low borderline
BjunB03G0023400 Alkaloid 8HGO medium borderline
BjunB03G0025000 Alkaloid 8HGO medium borderline
BjunB05G0013690 Alkaloid 8HGO medium borderline
BjunB06G0003760 Alkaloid 8HGO low borderline
BjunB06G0024410 Alkaloid 8HGO medium borderline
BjunB07G0020170 Alkaloid 8HGO medium pass
BjunB08G0021350 Alkaloid 8HGO low borderline
BjunB08G0047530 Alkaloid 8HGO low borderline
BjunSuper_scaffold_144_1249783_34209240057920 Alkaloid 8HGO medium borderline
BjunSuper_scaffold_5_1_6334723_245229_7451470068450 Alkaloid 8HGO medium borderline