PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
BjunA01G0008800 Steroid CYP90D1 medium borderline
BjunA01G0009580 Steroid CYP90D1 low borderline
BjunA01G0032820 Steroid CYP90D1 medium borderline
BjunA02G0001750 Steroid CYP90D1 medium borderline
BjunA02G0002110 Steroid CYP90D1 low borderline
BjunA02G0025700 Steroid CYP90D1 medium borderline
BjunA02G0030890 Steroid CYP90D1 low borderline
BjunA02G0033760 Steroid CYP90D1 low borderline
BjunA03G0001940 Steroid CYP90D1 medium borderline
BjunA03G0022290 Steroid CYP90D1 low borderline
BjunA03G0030780 Steroid CYP90D1 medium borderline
BjunA03G0037100 Steroid CYP90D1 low borderline
BjunA04G0013420 Steroid CYP90D1 medium borderline
BjunA04G0024880 Steroid CYP90D1 low borderline
BjunA05G0005190 Steroid CYP90D1 low borderline
BjunA05G0025870 Steroid CYP90D1 medium borderline
BjunA06G0025190 Steroid CYP90D1 low borderline
BjunA06G0028710 Steroid CYP90D1 low borderline
BjunA07G0006900 Steroid CYP90D1 low borderline
BjunA08G0004580 Steroid CYP90D1 low borderline
BjunA08G0005410 Steroid CYP90D1 medium borderline
BjunA09G0018050 Steroid CYP90D1 medium borderline
BjunA09G0043150 Steroid CYP90D1 low borderline
BjunA09G0043760 Steroid CYP90D1 low borderline
BjunA10G0022770 Steroid CYP90D1 medium borderline
BjunB01G0001510 Steroid CYP90D1 low borderline
BjunB01G0027350 Steroid CYP90D1 medium borderline
BjunB01G0032230 Steroid CYP90D1 medium borderline
BjunB02G0006360 Steroid CYP90D1 medium borderline
BjunB02G0030670 Steroid CYP90D1 medium borderline
BjunB02G0032750 Steroid CYP90D1 medium borderline
BjunB02G0039780 Steroid CYP90D1 low borderline
BjunB02G0042320 Steroid CYP90D1 medium borderline
BjunB02G0047600 Steroid CYP90D1 low borderline
BjunB02G0048300 Steroid CYP90D1 low borderline
BjunB03G0004710 Steroid CYP90D1 low borderline
BjunB03G0006860 Steroid CYP90D1 medium borderline
BjunB03G0008250 Steroid CYP90D1 low borderline
BjunB04G0004510 Steroid CYP90D1 low borderline
BjunB04G0010750 Steroid CYP90D1 medium borderline
BjunB05G0017730 Steroid CYP90D1 low borderline
BjunB05G0018450 Steroid CYP90D1 medium borderline
BjunB05G0023820 Steroid CYP90D1 low borderline
BjunB05G0024370 Steroid CYP90D1 medium borderline
BjunB06G0003000 Steroid CYP90D1 low borderline
BjunB07G0027420 Steroid CYP90D1 medium borderline
BjunB08G0024750 Steroid CYP90D1 low borderline
BjunContig501_1_1525584_15001_10356590037870 Steroid CYP90D1 medium borderline
BjunSuper_scaffold_5_1_6334723_245229_7451470068440 Steroid CYP90D1 low borderline