PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
BjunA03G0011450 Alkaloid 7DLGT low borderline
BjunA03G0011460 Alkaloid 7DLGT low borderline
BjunA03G0011480 Alkaloid 7DLGT low borderline
BjunA03G0011490 Alkaloid 7DLGT low borderline
BjunA03G0013040 Alkaloid 7DLGT low borderline
BjunA03G0013960 Alkaloid 7DLGT low borderline
BjunA03G0016510 Alkaloid 7DLGT low borderline
BjunA03G0016520 Alkaloid 7DLGT low borderline
BjunA03G0016530 Alkaloid 7DLGT low borderline
BjunA03G0017760 Alkaloid 7DLGT low borderline
BjunA03G0019080 Alkaloid 7DLGT low borderline
BjunA03G0019090 Alkaloid 7DLGT low borderline
BjunA03G0019100 Alkaloid 7DLGT low borderline
BjunA03G0020560 Alkaloid 7DLGT low borderline
BjunA03G0025520 Alkaloid 7DLGT high pass
BjunA03G0031230 Alkaloid 7DLGT low borderline
BjunA03G0033940 Alkaloid 7DLGT medium pass
BjunA03G0033950 Alkaloid 7DLGT low borderline
BjunA03G0033960 Alkaloid 7DLGT low borderline
BjunA03G0037880 Alkaloid 7DLGT low borderline
BjunA03G0039390 Alkaloid 7DLGT low borderline
BjunA03G0039410 Alkaloid 7DLGT medium pass
BjunA03G0039910 Alkaloid 7DLGT medium pass
BjunA03G0040490 Alkaloid 7DLGT low borderline
BjunA03G0040520 Alkaloid 7DLGT medium pass
BjunA03G0052310 Alkaloid 7DLGT medium pass
BjunA04G0004910 Alkaloid 7DLGT low borderline
BjunA04G0013450 Alkaloid 7DLGT high pass
BjunA04G0015960 Alkaloid 7DLGT medium pass
BjunA04G0018130 Alkaloid 7DLGT medium pass
BjunA04G0019410 Alkaloid 7DLGT low borderline
BjunA04G0019420 Alkaloid 7DLGT low borderline
BjunA04G0020620 Alkaloid 7DLGT medium pass
BjunA04G0020630 Alkaloid 7DLGT medium pass
BjunA05G0004030 Alkaloid 7DLGT low borderline
BjunA05G0004040 Alkaloid 7DLGT low borderline
BjunA05G0006930 Alkaloid 7DLGT low borderline
BjunA05G0006940 Alkaloid 7DLGT low borderline
BjunA05G0007070 Alkaloid 7DLGT low borderline
BjunA05G0007080 Alkaloid 7DLGT low borderline
BjunA05G0007090 Alkaloid 7DLGT medium pass
BjunA05G0007100 Alkaloid 7DLGT medium pass
BjunA05G0007140 Alkaloid 7DLGT medium pass
BjunA05G0009070 Alkaloid 7DLGT medium pass
BjunA05G0011410 Alkaloid 7DLGT low borderline
BjunA05G0012490 Alkaloid 7DLGT low borderline
BjunA05G0013220 Alkaloid 7DLGT low borderline
BjunA05G0018440 Alkaloid 7DLGT low borderline
BjunA05G0020090 Alkaloid 7DLGT medium pass
BjunA05G0020850 Alkaloid 7DLGT medium pass